New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1581220	48 (0.910)	4 (0.080)	4/248	NT	7.8%	coding (177/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	= 1581255	48 (0.930)					coding (142/3153 nt)	ttgB	efflux pump membrane protein TtgB

TCTGTACCTGTACCTGCGCGGTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCAGGCGAA  >  NC_002947/1581072‑1581366                                                                                                                                                       |                                                                                                                                                    tCTGTACCTGTACCTGCGCGGTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTG                                                                                                                                                     >  5:53369‑M1/1‑149 (MQ=255)       cctgtacctgCGCGGTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCGCAACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTcc                                                                                                                                                  <  1:104360/148‑1 (MQ=255)             cctgCGCGGTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGtt                                                                                                                                         >  5:316729/1‑149 (MQ=255)                 cgcgGTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTgc                                                                                                                                      <  5:55723/148‑1 (MQ=255)                    ggTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCg                                                                                                                                  <  6:316729/149‑1 (MQ=255)                     gtgtCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGGCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGa                                                                                                                                 <  5:86671/149‑1 (MQ=255)                      tgtCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAg                                                                                                                                <  7:209783/149‑1 (MQ=255)                                  tGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAg                                                                                                                                <  5:116080/137‑1 (MQ=255)                                  tGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAg                                                                                                                                >  6:116080/1‑137 (MQ=255)                                  tGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAg                                                                                                                    <  1:177628/149‑1 (MQ=255)                                     ccTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGt                                                                                                                  >  2:58049/1‑148 (MQ=255)                                      cTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGacctacccgggcgcctcggcgcaaaccgtgcaggaca                                                                                                                >  1:44339‑M1/1‑112 (MQ=255)                                       tGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTcac                                                                                                               <  5:169747‑M2/149‑4 (MQ=255)                                       tGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTcac                                                                                                               <  1:49739‑M2/149‑4 (MQ=255)                                           cGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGacctacccgggcgcctcggcgcaaaccgtgcaggacaccgt                                                                                                            <  2:44339‑M1/148‑42 (MQ=255)                                              aGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACggcgatg                                                                                                        <  3:180237/149‑1 (MQ=255)                                                      gTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCgatggcgatggc                                                                                                >  5:128519/1‑149 (MQ=255)                                                      gTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCgatggcgatggc                                                                                                >  2:169694/1‑149 (MQ=255)                                                            gTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCCCGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTggcgg                                                                                          >  7:72867/1‑149 (MQ=255)                                                                  ctgcCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGa                                                                                     <  7:170375/148‑1 (MQ=255)                                                                        tCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTgg‑g                                                                             >  1:85877/1‑149 (MQ=255)                                                                                  tttCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGacctacccgggcgcctcggcgcaaaccgtgcaggacaccgtg                                                                                                           >  1:44149‑M1/1‑68 (MQ=255)                                                                                  tttCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGacctacccgggcgcctcggcgcaaaccgtgcaggacaccgtg                                                                                                           <  2:44149‑M1/110‑43 (MQ=255)                                                                                  tttCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGtt                                                                    >  3:125509/1‑148 (MQ=255)                                                                                      cg‑‑acgaCACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATc                                                                <  6:128519/148‑1 (MQ=255)                                                                                          acgacACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCgg                                                              >  2:54262/1‑148 (MQ=255)                                                                                          acgacACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCgg                                                              >  4:296318/1‑148 (MQ=255)                                                                                                caTAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTc                                                       <  2:85877/149‑1 (MQ=255)                                                                                                 aTAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGAtggct                                                                                               >  8:173654/1‑109 (MQ=255)                                                                                                 aTAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGgcgc                                                                                       >  8:239088/1‑117 (MQ=255)                                                                                                    aCGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAgg                                                    <  1:169694/148‑1 (MQ=255)                                                                                                    aCGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGa                                                   >  7:247364/1‑149 (MQ=255)                                                                                                        aGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGa                                               <  1:54262/149‑1 (MQ=255)                                                                                                         ggTTGTCGATACCGTTGAGCTGCGGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGAc                                              <  8:72867/149‑1 (MQ=255)                                                                                                              tCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGGAGGTACTGGTTGATCGGCAGCTTCAGGATGGACAAgg                                          <  1:58049/149‑1 (MQ=255)                                                                                                                gATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGcc                                        <  3:296318/148‑1 (MQ=255)                                                                                                                      gTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTg                                                                                <  4:118676/103‑1 (MQ=255)                                                                                                                      gTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTg                                                                                >  3:118676/1‑103 (MQ=255)                                                                                                                               ctgctCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACtt                                                                       <  8:138086/102‑2 (MQ=255)                                                                                                                               ctgctCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTg                                                                       >  7:138086/1‑102 (MQ=255)                                                                                                                                tgctCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGc                                                             >  4:184619/1‑111 (MQ=255)                                                                                                                                  ctCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCAcc                      >  4:164595/1‑148 (MQ=255)                                                                                                                                  ctCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCAc                       <  6:53369/147‑1 (MQ=255)                                                                                                                                  ctCGATCACCTGCACCACGGGGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAgg                                          <  4:303884/128‑1 (MQ=255)                                                                                                                                     gATCACCTGCACCCCGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAgg                  >  6:197916/1‑149 (MQ=255)                                                                                                                                      aTCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGc                 >  6:240109/1‑149 (MQ=255)                                                                                                                                       tCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGc                 >  6:197612/1‑148 (MQ=255)                                                                                                                                           cTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGcccc                                      >  5:268744/1‑123 (MQ=255)                                                                                                                                           cTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGcccc                                      <  6:268744/123‑1 (MQ=255)                                                                                                                                              caccacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGAt                                                  <  6:247381/108‑1 (MQ=255)                                                                                                                                              caccacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGAt                                                  >  5:247381/1‑108 (MQ=255)                                                                                                                                               accacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCa        <  8:247364/149‑1 (MQ=255)                                                                                                                                                ccacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCAg       >  5:74815/1‑149 (MQ=255)                                                                                                                                                ccacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCAg       <  5:240109/149‑1 (MQ=255)                                                                                                                                                 cacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTcaccgtggtgcaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcggaaa                                              <  2:44149‑M2/110‑69 (MQ=255)                                                                                                                                                 cacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTcaccgtggtgcaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcggaaa                                              >  1:44149‑M2/1‑42 (MQ=255)                                                                                                                                                 cacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCAgg      <  2:49739/149‑1 (MQ=255)                                                                                                                                                 cacGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCAgg      >  7:148586/1‑149 (MQ=255)                                                                                                                                                  acGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTcaccgtggtgcaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcggaaagtaactccgacggcagcatgaccattaccgccaccttcg       <  2:44339‑M2/148‑108 (MQ=255)                                                                                                                                                     gtgtCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCa                              <  2:125055/121‑1 (MQ=255)                                                                                                                                                     gtgtCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCa                              >  1:125055/1‑121 (MQ=255)                                                                                                                                                     gTGacctacccgggcgcctcggcgcaaaccgtgcaggacaccgtggtgcaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcggaaagtaactccgacggcagcatgaccattaccgccaccttcgaaca   <  5:169747‑M1/149‑147 (MQ=255)                                                                                                                                                     gTGacctacccgggcgcctcggcgcaaaccgtgcaggacaccgtggtgcaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcggaaagtaactccgacggcagcatgaccattaccgccaccttcgaaca   <  1:49739‑M1/149‑147 (MQ=255)                                                                                                                                                      tgtCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTcaccgtggtgcaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcggaaagtaactccgacggcagcatgaccattaccgccaccttcgaacag  >  1:44339‑M2/1‑37 (MQ=255)                                                                                                                                                       |                                                                                                                                                    TCTGTACCTGTACCTGCGCGGTGTCGGGGTTGGTGCCCTGTTCGAAGGTGGCGGTAATGGTCATGCTGCCGTCGGAGTTACTTTCCG‑‑ACGACACATAACGCAGGTTGTCGATACCGTTGAGCTGCTGCTCGATCACCTGCACCACGGTGTCCTGCACGGTTTGCGCCGAGGCGCCCGGGTAGGTCACGGCGATGGCGATGGCTGGCGGCGCGATACTGG‑GGTACTGGTTGATCGGCAGCTTCAGGATGGACAAGGCCCCGACCAGCATGATCACCAAGGCGATCACCCAGGCGAA  >  NC_002947/1581072‑1581366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.