New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1605278 = | 34 (0.640) | 3 (0.060) | 3/242 | NT | 9.8% | coding (973/1707 nt) | PP_1407 | sulfate transporter |
? | NC_002947 | 1605342 = | 23 (0.460) | coding (909/1707 nt) | PP_1407 | sulfate transporter |
CCCAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCG > NC_002947/1605136‑1605423 | cccAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCtttt < 3:152866/149‑1 (MQ=255) cccAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCtttt < 3:158068/149‑1 (MQ=255) ccAGCGATTTGATGTCGATCAGCCCCTAGCCCGGCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCAGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCtttt < 3:100316/148‑1 (MQ=255) ccAGCGATTTGATGTCGATCAGCCCCTAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCAGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCtttt > 4:100316/1‑148 (MQ=255) cAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGc < 5:308994/149‑1 (MQ=255) aTGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCACCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCAt > 4:25181/1‑149 (MQ=255) tGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCCGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCCCCGACCATg > 2:104309/1‑149 (MQ=255) caccgtcagcttctgcagcgccatgcttaccgcacgcagctttgccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCttt > 8:206204‑M1/128‑133 (MQ=255) caccgtcagcttctgcagcgccatgcttaccgcacgcagctttgccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCttt < 7:206204‑M1/6‑1 (MQ=255) aGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGa < 5:235132/148‑1 (MQ=255) cAGCCCGCCATCCGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCACGATCAGGGCAATCACCAGGGCCGC‑GATGACGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGt < 6:46499/149‑1 (MQ=255) aTCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTc > 4:278481/1‑149 (MQ=255) tCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCg > 2:240072/1‑149 (MQ=255) agcaCGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCAcc > 7:181138/1‑149 (MQ=255) agcaCGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCCCTGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCAc < 1:104309/149‑1 (MQ=255) ggCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGa > 6:274362/1‑122 (MQ=255) ggCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGa < 5:274362/122‑1 (MQ=255) ggCACCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGa < 3:25181/149‑1 (MQ=255) cgcAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGc < 5:103151/149‑1 (MQ=255) ccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGccc > 3:333877‑M1/84‑148 (MQ=255) ccTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTgg < 1:240072/149‑1 (MQ=255) tGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGt > 5:263844/1‑113 (MQ=255) tGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGt < 6:263844/113‑1 (MQ=255) cccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCt > 3:45615‑M1/81‑146 (MQ=255) cccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCt < 4:45615‑M1/66‑1 (MQ=255) tCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCg < 3:278481/149‑1 (MQ=255) ccATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCtttt > 6:49118/1‑73 (MQ=255) ccATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCtttt < 5:49118/73‑1 (MQ=255) aagaaCAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGcc > 4:270244/1‑149 (MQ=255) gaaCAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATg > 4:212796/1‑70 (MQ=255) ggATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGa > 4:172763/1‑96 (MQ=255) aGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAAtac > 5:57704/1‑147 (MQ=255) gCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTg < 3:270244/149‑1 (MQ=255) gCAATCAACCTTGCCGC‑GATGATGCCTTCCAGCTGGCTTTTGGCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTg < 6:57704/149‑1 (MQ=255) cAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTgg < 7:252974/142‑1 (MQ=255) cAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTgg > 8:252974/1‑142 (MQ=255) tGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGa > 3:58211/1‑149 (MQ=255) ccGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATc < 8:181138/149‑1 (MQ=255) aCCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCg > 8:111272/1‑149 (MQ=255) gCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGggcg < 7:111272/149‑1 (MQ=255) | CCCAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGC‑GATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCG > NC_002947/1605136‑1605423 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |