New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1605278 =34 (0.640)3 (0.060) 3/242 NT 9.8% coding (973/1707 nt) PP_1407 sulfate transporter
?NC_002947 1605342 = 23 (0.460)coding (909/1707 nt) PP_1407 sulfate transporter

CCCAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCG  >  NC_002947/1605136‑1605423
                                                                                                                                               |                                                                                                                                                 
cccAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCtttt                                                                                                                                             <  3:152866/149‑1 (MQ=255)
cccAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCtttt                                                                                                                                             <  3:158068/149‑1 (MQ=255)
 ccAGCGATTTGATGTCGATCAGCCCCTAGCCCGGCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCAGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCtttt                                                                                                                                             <  3:100316/148‑1 (MQ=255)
 ccAGCGATTTGATGTCGATCAGCCCCTAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCAGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCtttt                                                                                                                                             >  4:100316/1‑148 (MQ=255)
  cAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGc                                                                                                                                           <  5:308994/149‑1 (MQ=255)
            aTGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCACCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCAt                                                                                                                                 >  4:25181/1‑149 (MQ=255)
             tGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCCGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCCCCGACCATg                                                                                                                                >  2:104309/1‑149 (MQ=255)
                caccgtcagcttctgcagcgccatgcttaccgcacgcagctttgccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCttt                                                                                                                                              >  8:206204‑M1/128‑133 (MQ=255)
                caccgtcagcttctgcagcgccatgcttaccgcacgcagctttgccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCttt                                                                                                                                              <  7:206204‑M1/6‑1 (MQ=255)
                     aGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGa                                                                                                                         <  5:235132/148‑1 (MQ=255)
                           cAGCCCGCCATCCGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCACGATCAGGGCAATCACCAGGGCCGCGATGACGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGt                                                                                                                  <  6:46499/149‑1 (MQ=255)
                                    aTCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTc                                                                                                         >  4:278481/1‑149 (MQ=255)
                                     tCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCg                                                                                                        >  2:240072/1‑149 (MQ=255)
                                          agcaCGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCAcc                                                                                                   >  7:181138/1‑149 (MQ=255)
                                          agcaCGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCCCTGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCAc                                                                                                    <  1:104309/149‑1 (MQ=255)
                                               ggCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGa                                                                                                                         >  6:274362/1‑122 (MQ=255)
                                               ggCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGa                                                                                                                         <  5:274362/122‑1 (MQ=255)
                                               ggCACCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGa                                                                                              <  3:25181/149‑1 (MQ=255)
                                                        cgcAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGc                                                                                     <  5:103151/149‑1 (MQ=255)
                                                            ccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGccc                                                                                   >  3:333877‑M1/84‑148 (MQ=255)
                                                             ccTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTgg                                                                                <  1:240072/149‑1 (MQ=255)
                                                               tGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGt                                                                                                                  >  5:263844/1‑113 (MQ=255)
                                                               tGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGt                                                                                                                  <  6:263844/113‑1 (MQ=255)
                                                               cccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCt                                                                                  >  3:45615‑M1/81‑146 (MQ=255)
                                                               cccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCt                                                                                  <  4:45615‑M1/66‑1 (MQ=255)
                                                                      tCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCg                                                                       <  3:278481/149‑1 (MQ=255)
                                                                            ccATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCtttt                                                                                                                                             >  6:49118/1‑73 (MQ=255)
                                                                            ccATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCtttt                                                                                                                                             <  5:49118/73‑1 (MQ=255)
                                                                                          aagaaCAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGcc                                                   >  4:270244/1‑149 (MQ=255)
                                                                                            gaaCAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATg                                                                                                                                >  4:212796/1‑70 (MQ=255)
                                                                                                    ggATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGa                                                                                              >  4:172763/1‑96 (MQ=255)
                                                                                                         aGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAAtac                                    >  5:57704/1‑147 (MQ=255)
                                                                                                            gCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTg                                 <  3:270244/149‑1 (MQ=255)
                                                                                                            gCAATCAACCTTGCCGCGATGATGCCTTCCAGCTGGCTTTTGGCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTg                                 <  6:57704/149‑1 (MQ=255)
                                                                                                                    cAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTgg                                <  7:252974/142‑1 (MQ=255)
                                                                                                                    cAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTgg                                >  8:252974/1‑142 (MQ=255)
                                                                                                                       tGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGa                      >  3:58211/1‑149 (MQ=255)
                                                                                                                         ccGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATc                    <  8:181138/149‑1 (MQ=255)
                                                                                                                                        aCCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCg      >  8:111272/1‑149 (MQ=255)
                                                                                                                                            gCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGggcg  <  7:111272/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                 
CCCAGCGATTTGATGTCGATCAGCCCCCAGCCCGCCATCAGCAGCACGGCGCCCAGCGCAGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCG  >  NC_002947/1605136‑1605423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.