New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1605278 =34 (0.640)3 (0.060) 3/242 NT 9.8% coding (973/1707 nt) PP_1407 sulfate transporter
?NC_002947 1605342 = 23 (0.460)coding (909/1707 nt) PP_1407 sulfate transporter

AGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTGGCGATACCCAGG  >  NC_002947/1605195‑1605480
                                                                                                                                                   |                                                                                                                                          
ccgcccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGccc                                                                                                                                            >  3:333877‑M1/84‑148 (MQ=255)
  ccTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTgg                                                                                                                                         <  1:240072/149‑1 (MQ=255)
   cccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCt                                                                                                                                           <  4:45615‑M1/66‑1 (MQ=255)
   cccggcatggctatgcgatcaacgccaaccacgaattcgtcgccctgggcgtgagcaacctggcggccggggtttcccagGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCt                                                                                                                                           >  3:45615‑M1/81‑146 (MQ=255)
           tCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCg                                                                                                                                <  3:278481/149‑1 (MQ=255)
                               aagaaCAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGcc                                                                                                            >  4:270244/1‑149 (MQ=255)
                                              aGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAAtac                                                                                             >  5:57704/1‑147 (MQ=255)
                                                 gCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTg                                                                                          <  3:270244/149‑1 (MQ=255)
                                                 gCAATCAACCTTGCCGCGATGATGCCTTCCAGCTGGCTTTTGGCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTg                                                                                          <  6:57704/149‑1 (MQ=255)
                                                         cAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTgg                                                                                         >  8:252974/1‑142 (MQ=255)
                                                         cAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTgg                                                                                         <  7:252974/142‑1 (MQ=255)
                                                            tGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGa                                                                               >  3:58211/1‑149 (MQ=255)
                                                              ccGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATc                                                                             <  8:181138/149‑1 (MQ=255)
                                                                            aCCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCg                                                               >  8:111272/1‑149 (MQ=255)
                                                                                gCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGggcg                                                           <  7:111272/149‑1 (MQ=255)
                                                                                 agggctttgccatcagcggtgccgactcgcgcactgcagtcaacgacatggtcggtggcaaaagccCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCggg                                                             >  3:45615‑M2/67‑146 (MQ=255)
                                                                                 agggctttgccatcagcggtgccgactcgcgcactgcagtcaacgacatggtcggtggcaaaagccCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCggg                                                             <  4:45615‑M2/80‑1 (MQ=255)
                                                                                  gggctttgccatcagcggtgccgactcgcgcactgcagtcaacgacatggtcggtggcaaaagccCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGggcgg                                                          >  3:333877‑M2/66‑148 (MQ=255)
                                                                                    GCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCa                                                        <  1:295554‑M1/148‑1 (MQ=255)
                                                                                      TTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGt                                                                                  <  7:228162‑M1/120‑1 (MQ=255)
                                                                                      TTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGt                                                                                  >  8:228162‑M1/1‑120 (MQ=255)
                                                                                              ccGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCtgcgtgc                                             <  2:295554/149‑1 (MQ=255)
                                                                                                   cATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGTCATGCCGGGCGGCAAAGCTGCGTGCGGt                                          >  2:269858/1‑147 (MQ=255)
                                                                                                   cATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGTCATGCCGGGCGGCAAAGCTGCGTGCGGTaa                                        <  1:269858/149‑1 (MQ=255)
                                                                                                   cATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGt                                          >  3:164721/1‑147 (MQ=255)
                                                                                                   cATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTaa                                        >  2:64027/1‑149 (MQ=255)
                                                                                                   cATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTaa                                        <  1:64027/149‑1 (MQ=255)
                                                                                                         gTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATgg                                  >  6:168993/1‑149 (MQ=255)
                                                                                                                            tCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTaa                                        >  7:93268/1‑124 (MQ=255)
                                                                                                                            tCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTaa                                        <  8:93268/124‑1 (MQ=255)
                                                                                                                            tCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGt               >  5:157367/1‑149 (MQ=255)
                                                                                                                              ggCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTgg             <  6:157367/149‑1 (MQ=255)
                                                                                                                                      tGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTGGCGATAcc      >  2:60226/1‑148 (MQ=255)
                                                                                                                                        aTGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTGGCGATACCCAg   <  5:168993/149‑1 (MQ=255)
                                                                                                                                        aTGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTGGCGATACCCAg   >  4:29688/1‑149 (MQ=255)
                                                                                                                                         tGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTGGCGATACCCAgg  <  4:58211/149‑1 (MQ=255)
                                                                                                                                           gCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCt                                                   <  4:160357/98‑1 (MQ=255)
                                                                                                                                           gCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCt                                                   >  3:160357/1‑98 (MQ=255)
                                                                                                                                             aaagccCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTg              <  7:206204‑M2/127‑1 (MQ=255)
                                                                                                                                             aaagccCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTg              >  8:206204‑M2/7‑133 (MQ=255)
                                                                                                                                                   |                                                                                                                                          
AGCCTGCGGGATCCAGGCCATGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGTTGCTCACGCCCAGGGCGACGAATTCGTGGTTGGCGTTGATCGCATAGCCATGCCGGGCGGCAAAGCTGCGTGCGGTAAGCATGGCGCTGCAGAAGCTGACGGTGGCGATACCCAGG  >  NC_002947/1605195‑1605480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.