New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2739580 =	56 (1.060)	4 (0.080)	4/240	NT	7.4%	coding (1959/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
	?	NC_002947	2739650 =	47 (0.940)					coding (2029/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein

GTGGCCTGCATGTACACGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGG  >  NC_002947/2739435‑2739728                                                                                                                                                   |                                                                                                                                                     gTGGCCTGCATGTACACGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCgg                                                                                                                                                   <  6:305751/149‑1 (MQ=255) agcagccgcatgcgatcaacgctgctggcggcctgtaccagtgcttgcgcagtgcgcgcgctcagccccgggaacacccggcgcagcgccgcgctgccgggggtgtcgctgggctgcaaggcttcgaaaaggtgctgcagcagtgtTCg                                                                                                                                                    <  8:63349‑M1/3‑1 (MQ=255)    agccgcatgcgatcaacgctgctggcggcctgtaccagtgcttgcgcagtgcgcgcgctcagccccgggaacacccggcgcagcgccgcgctgccgggggtgtcgctgggctgcaaggcttcgaaaaggtgctgcagcagtgtTCGgcg                                                                                                                                                 <  5:47518‑M1/6‑1 (MQ=255)            gTACACGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAgg                                                                                                                                        >  3:279704/1‑149 (MQ=255)              acacGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGACAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCCGTAGCAGATACAACAGTCCTCGATCACGCTCGGCGCCTGCCAGGtt                                                                                                                                      >  3:208035/1‑148 (MQ=255)                acGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGc                                                                                                                                     >  5:222666/1‑148 (MQ=255)                acGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGc                                                                                                                                     >  6:140178/1‑148 (MQ=255)                  gCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAg                                                                                                                                  <  4:279704/149‑1 (MQ=255)                     cAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATTCAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTgg                                                                                                                               >  1:163736/1‑149 (MQ=255)                        gCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCt                                                                                                                            >  2:274193/1‑149 (MQ=255)                          aCCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGa                                                                                                                          >  6:267226/1‑149 (MQ=255)                            cGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGa                                                                                                                          >  1:317470/1‑147 (MQ=255)                               gCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGAt                                                                                                                     <  7:188570/149‑1 (MQ=255)                                cctgtaccagtgcttgcgcagtgcgcgcgctcagccccgggaacacccggcgcagcgccgcgctgccgggggtgtcgctgggctgcaaggcttcgaaaaggtgctgcagcagtgtTCGGCGCCTGCCAGGTGCGAGTGGCCTGa                                                                                                                          <  4:137462‑M1/29‑1 (MQ=255)                                      gatgatCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCAc                                                                                                              <  1:274193/149‑1 (MQ=255)                                       atgatCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACt                                                                                                             <  6:222666/149‑1 (MQ=255)                                       atgatCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACt                                                                                                             <  5:267226/149‑1 (MQ=255)                                          atCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGc                                                                                                          >  5:344117/1‑149 (MQ=255)                                           tCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTgg                                                                                                           >  7:129354/1‑147 (MQ=255)                                           tCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTgg                                                                                                           <  8:129354/147‑1 (MQ=255)                                            cGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGc                                                                                                                                     >  2:15884/1‑120 (MQ=255)                                              aCAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTg                                                                                                            >  2:8409/1‑143 (MQ=255)                                              aCAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTg                                                                                                            <  1:8409/143‑1 (MQ=255)                                                   gTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGc                                                                                                 >  7:247007/1‑149 (MQ=255)                                                            gTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAg                                                                                                                       >  8:136183/1‑118 (MQ=255)                                                            gTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAg                                                                                                                       <  7:136183/118‑1 (MQ=255)                                                                 gCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGcc                                                                                   <  2:49648/149‑1 (MQ=255)                                                                   ttGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCg                                                                                  >  5:105063/1‑148 (MQ=255)                                                                     cgggaacacccggcgcagcgccgcgctgccgggggtgtcgctgggctgcaaggcttcgaaaaggtgctgcagcagtgtTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGaa                                                                                >  3:162294‑M1/79‑149 (MQ=255)                                                                      aTCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAaca                                                                              <  4:151364/149‑1 (MQ=255)                                                                       tCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGAc                                                                                                                         <  1:170571/105‑1 (MQ=255)                                                                       tCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGAc                                                                                                                         >  2:170571/1‑105 (MQ=255)                                                                       tCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAacac                                                                             <  5:140178/149‑1 (MQ=255)                                                                       tCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCAATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAacac                                                                             <  2:193773/149‑1 (MQ=255)                                                                       ggaacacccggcgcagcgccgcgctgccgggggtgtcgctgggctgcaaggcttcgaaaaggtgctgcagcagtgtTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAaca                                                                              >  3:137462‑M1/77‑149 (MQ=255)                                                                        gaacacccggcgcagcgccgcgctgccgggggtgtcgctgggctgcaaggcttcgaaaaggtgctgcagcagtgtTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAacac                                                                             >  2:78301‑M1/76‑149 (MQ=255)                                                                           cGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACActgct                                                                         >  4:321252/1‑149 (MQ=255)                                                                             cATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACtgctgc                                                                       <  2:317470/149‑1 (MQ=255)                                                                                  gcagcaTGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCAc                                                                  >  2:346405/1‑149 (MQ=255)                                                                                      caTGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTg                                                                                                                                      <  6:314305/77‑1 (MQ=255)                                                                                      caTGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTg                                                                                                                                      >  5:314305/1‑77 (MQ=255)                                                                                        tGATTGGCCGTCTGCGCAGCGGCGAGGCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCtttt                                                             >  1:3574/1‑149 (MQ=255)                                                                                           ttGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGaa                                                         <  6:344117/149‑1 (MQ=255)                                                                                             ggCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTgg                                                                                                                               >  4:132323/1‑77 (MQ=255)                                                                                             ggCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTgg                                                                                                                               <  3:132323/77‑1 (MQ=255)                                                                                              gCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAgcgc                                                                                    >  4:327208/1‑119 (MQ=255)                                                                                                cGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCtt                                                    <  8:247007/149‑1 (MQ=255)                                                                                                  tCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGc                                                  <  1:346405/149‑1 (MQ=255)                                                                                                    tGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAg                                                >  8:323097/1‑149 (MQ=255)                                                                                                      cgcAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGGGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGTCTgg                                                                                             <  4:298480/102‑1 (MQ=255)                                                                                                      cgcAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGACCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAg                                                <  2:260889/147‑1 (MQ=255)                                                                                                      cgcAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTCGTCTgg                                                                                             >  3:298480/1‑102 (MQ=255)                                                                                                          gcggcgA‑GCCGGTAGCAGATACAAGAGTGCTCGTTCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGTAGCCTTGCAGCCCAGc                                          <  2:163736/149‑1 (MQ=255)                                                                                                                      gTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGc                                                       >  8:224106/1‑125 (MQ=255)                                                                                                                            gATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCCgcgc                         >  6:246340/1‑149 (MQ=255)                                                                                                                                 aacaGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTTCAGCCCCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGgcgc                    >  2:40562/1‑149 (MQ=255)                                                                                                                                 aacaGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTc                                                            >  6:86498/1‑109 (MQ=255)                                                                                                                                 aacaGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTc                                                            <  5:86498/109‑1 (MQ=255)                                                                                                                                         tCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCgg            >  7:259180/1‑149 (MQ=255)                                                                                                                                           gATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCggg           <  5:246340/148‑1 (MQ=255)                                                                                                                                           gATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGgt          <  2:3574/149‑1 (MQ=255)                                                                                                                                            aTCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCGGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGgtg         >  3:255034/1‑149 (MQ=255)                                                                                                                                             tCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGgtgt        >  8:152721/1‑149 (MQ=255)                                                                                                                                                 gCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCt                   <  7:303052/134‑1 (MQ=255)                                                                                                                                                 gCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCt                   >  8:303052/1‑134 (MQ=255)                                                                                                                                                 gCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTccc    >  5:215133/1‑149 (MQ=255)                                                                                                                                                  cTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCGGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCg   <  4:255034/149‑1 (MQ=255)                                                                                                                                                  cTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCg   <  8:259180/149‑1 (MQ=255)                                                                                                                                                   TCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCgg  <  1:75877‑M1/149‑1 (MQ=255)                                                                                                                                                   TCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCgg  <  7:40691‑M1/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GTGGCCTGCATGTACACGCCCAGGCACCGAGCCCCGGGATGATCGACAGCGTGGCGCGGGTCAGGCTTGATCAACGCATCCGCAGCATGATTGGCCGTCTGCGCAGCGGCGA‑GCCGGTAGCAGATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGG  >  NC_002947/2739435‑2739728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.