New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 303060365 (1.230)4 (0.080) 4/236 NT 6.0% intergenic (+603/‑91) pcaY/mgtA aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
?NC_002947 = 3030618 66 (1.350)intergenic (+618/‑76) pcaY/mgtA aromatic acid chemoreceptor/ATP‑dependent magnesium transporter

GCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAGCAACATGACTGTCA  >  NC_002947/3030456‑3030751
                                                                                                                                                   |                                                                                                                                                    
gCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGac                                                                                                                                                     <  8:136880/149‑1 (MQ=255)
   cccGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGacac                                                                                                                                                   >  5:243806/1‑148 (MQ=255)
   cccGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGacac                                                                                                                                                   >  7:28887/1‑148 (MQ=255)
     cGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAAc                                                                                                                                                >  7:229905/1‑149 (MQ=255)
                cTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCtc                                                                                                                                     >  6:153910‑M2/1‑147 (MQ=255)
                   aaTAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTTCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCtcgg                                                                                                                                   >  8:28887‑M2/1‑144 (MQ=255)
                     tAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCtcggcag                                                                                                                                <  6:49049‑M2/149‑8 (MQ=255)
                       aaaGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCtcggcagcg                                                                                                                              <  4:24429‑M2/149‑10 (MQ=255)
                       aaaGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCtcggcagcg                                                                                                                              <  8:34258‑M2/149‑10 (MQ=255)
                         aGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGga                                                                                                                            >  4:205062/1‑149 (MQ=255)
                          gATATTGAACGGTATCTTTGTACTCGAAATTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGgac                                                                                                                           <  5:49049/149‑1 (MQ=255)
                                    ggTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGt                                                                                                                 <  3:172983/149‑1 (MQ=255)
                                      tATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCg                                                                                                               <  8:229905/149‑1 (MQ=255)
                                        tCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGgaca                                                                                                                          >  8:247540/1‑136 (MQ=255)
                                        tCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGgaca                                                                                                                          <  7:247540/136‑1 (MQ=255)
                                        tCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCgg                                                                                                              <  7:301445/148‑1 (MQ=255)
                                                cTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGaa                                                                                                        <  2:87107/146‑1 (MQ=255)
                                                cTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGaa                                                                                                        >  1:87107/1‑146 (MQ=255)
                                                 tCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAg                                                                                                    >  5:262335/1‑149 (MQ=255)
                                                 tCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAg                                                                                                    >  1:334002/1‑149 (MQ=255)
                                                 tCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATAGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGgaca                                                                                                                          >  6:223570/1‑127 (MQ=255)
                                                 tCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATAGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGgaca                                                                                                                          <  5:223570/127‑1 (MQ=255)
                                                 gcGAACTTTTAACATGAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAg                                                                                                    >  1:257983/2‑149 (MQ=255)
                                                         ttCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCattatt                                                                                             <  6:262335/148‑1 (MQ=255)
                                                          tCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCCGCGGACAGACAACTGTCGGAAAGAACCAGCattatt                                                                                             >  8:245524/1‑147 (MQ=255)
                                                          tCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTc                                                                                            <  7:34258/148‑1 (MQ=255)
                                                           cATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCa                                                                                           <  6:243806/148‑1 (MQ=255)
                                                               ttAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCa                                                                                           <  4:296266/144‑1 (MQ=255)
                                                               ttAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAgagat                                                                                      >  3:296266/1‑148 (MQ=255)
                                                               ttAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGAc                                                                                      >  2:229495/1‑149 (MQ=255)
                                                                tAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGAcc                                                                                     >  3:100562/1‑149 (MQ=255)
                                                                  aaaGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAg                                                                                                          <  4:134501/126‑1 (MQ=255)
                                                                  aaaGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAg                                                                                                          >  3:134501/1‑126 (MQ=255)
                                                                    aGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGAc                                                                                 <  1:229495/149‑1 (MQ=255)
                                                                                    aTTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCg                                                                        >  5:295404/1‑142 (MQ=255)
                                                                                    aTTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCg                                                                        <  6:295404/142‑1 (MQ=255)
                                                                                         ccTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGAgagtcggaagttgtgtcggcag                                                                                                                                <  7:252383‑M1/81‑23 (MQ=255)
                                                                                         ccTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGAgagtcggaagttgtgtcggcag                                                                                                                                >  8:252383‑M1/1‑59 (MQ=255)
                                                                                          cTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAg                                                           >  1:298783/1‑149 (MQ=255)
                                                                                          cTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAg                                                           >  2:321540/1‑149 (MQ=255)
                                                                                              gtTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGATGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGa                                                        >  1:134310/1‑148 (MQ=255)
                                                                                               tttATGAAACGGAATCAAACCATGCATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGaaa                                                      <  8:96876/149‑1 (MQ=255)
                                                                                                ttATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAAc                                                     >  2:53400/1‑149 (MQ=255)
                                                                                                 tATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAAc                                                     <  1:53400/148‑1 (MQ=255)
                                                                                                   tGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTc                                                                     <  4:36462/130‑1 (MQ=255)
                                                                                                    gAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAAc                                                     <  8:256913/145‑1 (MQ=255)
                                                                                                    gAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAAc                                                     >  7:256913/1‑145 (MQ=255)
                                                                                                     aaaaGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCa                                                                    <  8:145316/129‑1 (MQ=255)
                                                                                                     aaaaGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCa                                                                    >  7:145316/1‑129 (MQ=255)
                                                                                                     aaaaGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGATGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCt                                                 <  2:134310/148‑1 (MQ=255)
                                                                                                      aaaGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtgt                                               <  2:298783/149‑1 (MQ=255)
                                                                                                      aaaGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtgt                                               <  2:334002/149‑1 (MQ=255)
                                                                                                         ggAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGAgagtcggaagttgtgtcggcagc                                                                                                                               <  5:79816‑M1/66‑24 (MQ=255)
                                                                                                         ggAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGAgagtcggaagttgtgtcggcagc                                                                                                                               >  6:79816‑M1/1‑43 (MQ=255)
                                                                                                          gAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGc                                                                                                   <  8:79475/93‑1 (MQ=255)
                                                                                                          gAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtgt                                               <  5:278805/145‑1 (MQ=255)
                                                                                                          gAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtgt                                               >  6:278805/1‑145 (MQ=255)
                                                                                                           aaTCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTc                                          <  3:205062/149‑1 (MQ=255)
                                                                                                             tCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGt                                        >  7:93602/1‑149 (MQ=255)
                                                                                                              cAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTc                                          >  4:129693/1‑146 (MQ=255)
                                                                                                              cAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTc                                          <  3:129693/146‑1 (MQ=255)
                                                                                                                aaCCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGCCCCGACCTGCCTTCGTTCACCGCCTGATTGAAACGTCTGTGTGTCGTgcc                                     >  8:141760/1‑149 (MQ=255)
                                                                                                                  ccATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTgccgc                                   >  1:70023/1‑149 (MQ=255)
                                                                                                                        aTTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGc                             >  6:87683/1‑149 (MQ=255)
                                                                                                                        aTTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGc                             <  2:70023/149‑1 (MQ=255)
                                                                                                                            cgcgAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCa                         <  2:257983/149‑1 (MQ=255)
                                                                                                                                aGTAGAAAGTGCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCACGac                     <  5:305074/149‑2 (MQ=255)
                                                                                                                                 gTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGc                    <  5:87683/149‑1 (MQ=255)
                                                                                                                                    gAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtg                                                <  5:246078/118‑1 (MQ=255)
                                                                                                                                    gAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtg                                                >  6:246078/1‑118 (MQ=255)
                                                                                                                                    gAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtg                                                >  6:246080/1‑118 (MQ=255)
                                                                                                                                    gAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACAAGAATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCtg                                                <  5:246080/118‑1 (MQ=255)
                                                                                                                                     aaaGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAg                >  5:362809/1‑149 (MQ=255)
                                                                                                                                      aaGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAg                >  8:122305/1‑148 (MQ=255)
                                                                                                                                        gTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAGCaa             <  4:100562/149‑1 (MQ=255)
                                                                                                                                           cGCTGCCGAgagtcggaagttgtgtcggcagcgaactttctactcgcgcaatccatggtttgattccttttcataaacacagggaaatagttatcccgcgaacttttaacatgaaaagttcgagtacaaagataccgttcaatatcttt          <  4:24429‑M1/149‑141 (MQ=255)
                                                                                                                                           cGCTGCCGAgagtcggaagttgtgtcggcagcgaactttctactcgcgcaatccatggtttgattccttttcataaacacagggaaatagttatcccgcgaacttttaacatgaaaagttcgagtacaaagataccgttcaatatcttt          <  8:34258‑M1/149‑141 (MQ=255)
                                                                                                                                            gCTGCCGACACAACTTCCGACTCtcggcagcgaactttctactcgcgcaatccatggtttgattcc                                                                                            >  6:79816‑M2/1‑23 (MQ=255)
                                                                                                                                            gCTGCCGACACAACTTCCGACTCtcggcagcgaactttctactcgcgcaatccatggtttgattcc                                                                                            <  5:79816‑M2/66‑44 (MQ=255)
                                                                                                                                            gCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAGCAACAt          >  3:138005/1‑148 (MQ=255)
                                                                                                                                            gCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAGCAACAt          <  7:122305/148‑1 (MQ=255)
                                                                                                                                             cTGCCGAgagtcggaagttgtgtcggcagcgaactttctactcgcgcaatccatggtttgattccttttcataaacacagggaaatagttatcccgcgaacttttaacatgaaaagttcgagtacaaagataccgttcaatatctttta        <  6:49049‑M1/149‑143 (MQ=255)
                                                                                                                                             cTGCCGACACAACTTCCGACTCtcggcagcgaactttctactcgcgcaatccatggtttgattccttttcataaacacagg                                                                            <  7:252383‑M2/81‑60 (MQ=255)
                                                                                                                                             cTGCCGACACAACTTCCGACTCtcggcagcgaactttctactcgcgcaatccatggtttgattccttttcataaacacagg                                                                            >  8:252383‑M2/1‑22 (MQ=255)
                                                                                                                                                ccGAgagtcggaagttgtgtcggcagcgaactttctactcgcgaaatccatggtttgattccttttcataaacacagggaaatagttatcccgcgaacttttaacatgaaaagttcgagtacaaagataccgttcaatatcttttatt      >  8:28887‑M1/1‑4 (MQ=255)
                                                                                                                                                  gagagtcggaagttgtgtcggcagcgaactttctactcgcgcaatccatggtttgattccttttcataaacacagggaaatagttatcccgcgaacttttaacatgaaaagttcgagtacaaagataccgttcaatatcttttattcag   >  6:153910‑M1/1‑2 (MQ=255)
                                                                                                                                                   acacAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAGCAACATGACTGTCa  <  1:321540/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAACCATGGATTGCGCGAGTAGAAAGTTCGCTGCCGACACAACTTCCGACTCTCGGCAGCGGACAGACAACTGTCGGAAAGAACCAGCATTATTCAGCGACCCGACATGCCTTCGTTCACCGCCTGAGTGAAACGTCTGTGTGTCGTGCCGCCGCAGCGGCAGGAGCACAGCAACATGACTGTCA  >  NC_002947/3030456‑3030751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.