New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3306981 =	58 (1.100)	4 (0.080)	4/234	NT	6.6%	coding (618/696 nt)	csiR	DNA‑binding transcriptional repressor
	?	NC_002947	3307060 =	60 (1.230)					coding (539/696 nt)	csiR	DNA‑binding transcriptional repressor

CCTGGGCATCTAATGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCGAACAGGT  >  NC_002947/3306836‑3307123                                                                                                                                                  |                                                                                                                                               ccTGGGCATCTAATGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGgc                                                                                                                                              <  6:196682/148‑1 (MQ=255)   tGGGCATCTAATGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCt                                                                                                                                           >  8:61024/1‑149 (MQ=255)           tAATGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGttt                                                                                                                                   >  6:9739/1‑149 (MQ=255)            aaTGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGtttt                                                                                                                                  >  4:168977/1‑149 (MQ=255)             aTGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTg                                                                                                                                 <  7:39072/149‑1 (MQ=255)              tGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTgg                                                                                                                                >  7:335053/1‑149 (MQ=255)              tGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTgg                                                                                                                                <  5:143264/149‑1 (MQ=255)                   aTCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATcc                                                                                                                           >  4:235988/1‑149 (MQ=255)                        aTTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCgg                                                                                                                        <  7:61024/147‑1 (MQ=255)                               cAAAGAATAGACAACCAGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTg                                                                                                                                 <  6:84345/131‑1 (MQ=255)                               cAAAGAATAGACAACCAGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGAGAGCGCATCATGGCGCTGGCGGTTTTg                                                                                                                                 >  5:84345/1‑131 (MQ=255)                                aaaGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGgcgc                                                                                                                                            >  8:228865/1‑119 (MQ=255)                                aaaGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGAGGTTTTGGCATCCCGGGCGAGGATCa                                                                                                              >  5:271984/1‑149 (MQ=255)                                aaaGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGAGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGgcgc                                                                                                                                            <  7:228865/119‑1 (MQ=255)                                  aGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCAcc                                                                                                            <  5:9739/149‑1 (MQ=255)                                        gACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCAAGCGCATCATGGCGCTGGCGGtttt                                                                                                                                  <  4:339351/121‑1 (MQ=255)                                        cctcgggctgcggctccaagcacctgctgcaggcacgcacctacctgttcgaccaggccgagcgctaccgccacctgtggctgacgcagacggtgttttccgaagaGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGAc                                                                                                       <  7:128079‑M1/42‑1 (MQ=255)                                           aaCCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTg                                                                                                                                 >  4:151842/1‑119 (MQ=255)                                                gCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGc                                                                                              <  3:168977/149‑1 (MQ=255)                                                   aTTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATg                                                                                           <  7:64721/149‑1 (MQ=255)                                                       aaGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGAc                                                                                                       <  7:263280/133‑1 (MQ=255)                                                       aaGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGAc                                                                                                       >  8:263280/1‑133 (MQ=255)                                                         gAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTg                                                                                     >  2:11107/1‑149 (MQ=255)                                                             aaTTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGgcgc                                                                                 <  3:235988/149‑1 (MQ=255)                                                                  aTCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCtcaa                                                                             <  8:335053/148‑4 (MQ=255)                                                                     tAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAg                                                                                                                   <  5:44911/107‑1 (MQ=255)                                                                     tAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAg                                                                                                                   >  6:44911/1‑107 (MQ=255)                                                                       gCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGagc                                                                           <  1:11107/145‑1 (MQ=255)                                                                          acgcacctacctgttcgaccaggccgagcgctaccgccacctgtggctgacgcagacggtgttttccgaagaGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGagcgccagcg                                                                    <  4:191858‑M1/77‑1 (MQ=255)                                                                           cgcacctacctgttcgaccaggccgagcgctaccgccacctgtggctgacgcagacggtgttttccgaagaGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGagcgccagcgc                                                                   >  8:128079‑M1/72‑149 (MQ=255)                                                                             aCCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGAATCATGGCGCTGCCGGTTTTGGCATCCCGGGCGAGGATAACCTCGACCAGTGCCGCATGCTCATGGCCCTTAagcgccagcgcc                                                                  >  5:210846/1‑148 (MQ=255)                                                                              acctacctgttcgaccaggccgagcgctaccgccacctgtggctgacgcagacggtgttttccgaagaGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCctc                                                                >  3:191858‑M1/69‑149 (MQ=255)                                                                               cGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTg                                                                                     <  4:344594/127‑1 (MQ=255)                                                                               cGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTg                                                                                     >  3:344594/1‑127 (MQ=255)                                                                                 aTGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGTGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTc                                                             <  6:271984/149‑1 (MQ=255)                                                                                      ttCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGaa                                                         >  3:283102/1‑148 (MQ=255)                                                                                      ttCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGaa                                                         >  1:6366/1‑148 (MQ=255)                                                                                             tGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGt                                                 >  4:157226/1‑149 (MQ=255)                                                                                                   aTCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGt                                           >  4:137188/1‑149 (MQ=255)                                                                                                      tGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAg                                        >  2:121061/1‑149 (MQ=255)                                                                                                        cgcAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCa                                         <  3:157226/146‑1 (MQ=255)                                                                                                         gcAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCca                                     >  4:49126/1‑149 (MQ=255)                                                                                                               aTCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTg                               >  5:295400/1‑149 (MQ=255)                                                                                                                tCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTgg                              >  4:339814/1‑149 (MQ=255)                                                                                                                tCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTgg                              >  7:258391/1‑149 (MQ=255)                                                                                                                  ggTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCg                            <  4:283102/149‑1 (MQ=255)                                                                                                                   gTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCgg                           >  4:307720/1‑149 (MQ=255)                                                                                                                      ccGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAg                        <  8:258391/149‑1 (MQ=255)                                                                                                                       cGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGc                                             >  5:215114/1‑127 (MQ=255)                                                                                                                         gtgtCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAgcgc                     >  8:19536/1‑149 (MQ=255)                                                                                                                            tcatcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGTCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCg                            <  4:157358/139‑1 (MQ=255)                                                                                                                            tcatcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGTCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCg                            >  3:157358/1‑139 (MQ=255)                                                                                                                              atcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGc                >  4:98966/1‑149 (MQ=255)                                                                                                                               tcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGagcgccagcgcc                                                                  <  6:125485/98‑1 (MQ=255)                                                                                                                               tcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGagcgccagcgcc                                                                  >  5:125485/1‑98 (MQ=255)                                                                                                                               tcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGcc               <  3:307720/149‑1 (MQ=255)                                                                                                                               tcaGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGcc               <  3:98966/149‑1 (MQ=255)                                                                                                                                 aGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCt              <  6:295400/148‑1 (MQ=255)                                                                                                                                    tGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTc          <  3:49126/149‑1 (MQ=255)                                                                                                                                      cGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGTCTGGTCg         >  4:44678/1‑148 (MQ=255)                                                                                                                                      cGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCg         >  5:308708/1‑148 (MQ=255)                                                                                                                                          cgcATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCGAACag    >  6:104149/1‑149 (MQ=255)                                                                                                                                            catcatGGGGCTTGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTTGCGCTTGAGCGCAAGCGCCTCTTCGGAAAACACAGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCGAACaggt  <  6:210846/149‑1 (MQ=255)                                                                                                                                            catcatGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCGAACaggt  <  7:19536/149‑1 (MQ=255)                                                                                                                                            catcatGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCGAACagg   >  6:74535/1‑148 (MQ=255)                                                                                                                                                  GGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCa                                         >  7:246587‑M1/1‑104 (MQ=255)                                                                                                                                                  GGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCa                                         <  8:246587‑M1/104‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                               CCTGGGCATCTAATGGAGATCTGATTGTGCCAAAGAATAGACAACCGGCGATTTAAGAAAAATTCATCTAGCGGGCACCGATGCCTTCGGCGTGCATGATCTGCGCAATGATCGGTACCGGTGTCATCAGGTGCGAGCGCATCATGGCGCTGGCGGTTTTGGCATCCCGGGCGAGGATCACCTCGACCAGTGCCGCATGCTCCTGGCGCTTGAGCGCCAGCGCCTCTTCGGAAAACACCGTCTGCGTCAGCCACAGGTGGCGGTAGCGCTCGGCCTGGTCGAACAGGT  >  NC_002947/3306836‑3307123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.