New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3359940 =54 (1.020)6 (0.120) 5/248 NT 11.5% coding (1327/1581 nt) PP_2956 ribosomal protein S6 modification protein‑like protein
?NC_002947 3359972 = 40 (0.780)coding (1295/1581 nt) PP_2956 ribosomal protein S6 modification protein‑like protein

AGGTTGGGGTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGG  >  NC_002947/3359792‑3360085
                                                                                                                                                    |                                                                                                                                                 
aggagctgttcgaacactcggtactgctgctggcccaggagtactgctacaccgaatacgactggcgtatcggcgtactcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaag                                                                                                                                                   >  1:183221‑M1/149‑149 (MQ=255)
aGGTTGGGGTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACcgcgcg                                                                                                                                                   <  2:42379/149‑1 (MQ=255)
      gggTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAg                                                                                                                                             >  8:5669/1‑149 (MQ=255)
         ttGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGcc                                                                                                                                          >  1:221135/1‑149 (MQ=255)
            gcGTTGACTTCGATCACCAGTAGTAGGGCGGCGGTGTGCTTCAGGTCCTCTCCGTACAGCCGTTGCGGGATGAGCCTGGCAGTGTCGACGGCGAGCTTTTCGAGTTCGGGTGGTGCCTGTTCAACCTGGACCGCGCGGCACAGGCCGtt                                                                                                                                       <  8:110307/148‑1 (MQ=255)
              gTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGa                                                                                                                                     >  7:143376/1‑149 (MQ=255)
              gTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGa                                                                                                                                     <  7:5669/149‑1 (MQ=255)
               ttGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGAc                                                                                                                                    <  8:306683/149‑1 (MQ=255)
                    ttCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTCGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGc                                                                                                                               >  4:222206/1‑149 (MQ=255)
                           tgctggcccaggagtactgctacaccgaatacgactggcgtatcggcgtactcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaagg                                                                                                                                                  <  6:235003‑M1/2‑1 (MQ=255)
                           tgctggcccaggagtactgctacaccgaatacgactggcgtatcggcgtactcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaagg                                                                                                                                                  >  5:235003‑M1/122‑123 (MQ=255)
                           aCCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTg                                                                                                                        <  5:74445/149‑1 (MQ=255)
                            ccAGTACACGGTCGCCGGTCTGCTTCAGGTCCCCACCGTACCGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       >  7:217313/1‑149 (MQ=255)
                            ccAGTACACGGTCGCCGGTCTGCTTCAGGTCCACCCCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       <  7:314162/149‑1 (MQ=255)
                               gTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGcc                                                                                                                    >  6:63470/1‑149 (MQ=255)
                                  ccaggagtactgctacaccgaatacgactggcgtatcggcgtactcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 <  5:32516‑M1/35‑1 (MQ=255)
                                  cacGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 >  7:75871/1‑149 (MQ=255)
                                  cacGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGAAGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGCGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 <  8:27851/149‑1 (MQ=255)
                                   acGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtgt                                                                                                                >  8:80797/1‑149 (MQ=255)
                                       tCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGtt                                                                                                            <  2:221135/149‑1 (MQ=255)
                                         gCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       >  8:167798/1‑136 (MQ=255)
                                         gCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       <  7:167798/136‑1 (MQ=255)
                                                tGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGGCTTGTGGTTGTAGATTTg                                                                                                   >  7:142206/1‑149 (MQ=255)
                                                  cTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGAttt                                                                                                    <  7:36476/146‑1 (MQ=255)
                                                  cTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGAttt                                                                                                    <  5:63470/146‑1 (MQ=255)
                                                            acacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCATCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTGGCCGGCCTGGGCCTTGTGGTTGt                                                                                                          <  4:149449/130‑1 (MQ=255)
                                                            acacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGt                                                                                                                                        <  4:344366/100‑1 (MQ=255)
                                                            acacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGt                                                                                                                                        >  3:344366/1‑100 (MQ=255)
                                                            acacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTAGACGGCCAGCTATACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGt                                                                                                          >  3:149449/1‑130 (MQ=255)
                                                             cacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGc                                                                                                                           <  7:14664/112‑1 (MQ=255)
                                                             cacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGc                                                                                                                           >  8:14664/1‑112 (MQ=255)
                                                                  tACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACAt                                                                                 <  8:143376/149‑1 (MQ=255)
                                                                     aGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGaa                                                                              >  8:85246/1‑149 (MQ=255)
                                                                      ggccTTGGCGGTTGAGCCTGGCAGTGTCGTCGGCCAGCTTTACGACTTGGGGTGGTGCCTGTTGCAGGGGGACCGCGCGTCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGaa                                                                              <  3:222206/146‑1 (MQ=255)
                                                                       cccTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGc                                                                                                                           <  6:56139/102‑1 (MQ=255)
                                                                            gCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTg                                                                        <  8:217313/148‑1 (MQ=255)
                                                                             cccGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTgg                                                                       <  7:80797/148‑1 (MQ=255)
                                                                                gATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTgg                                                                                            >  3:254464/1‑124 (MQ=255)
                                                                                gATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTgg                                                                                            <  4:254464/124‑1 (MQ=255)
                                                                                gATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAgg                                                                   >  6:128558/1‑149 (MQ=255)
                                                                                         ggCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTgg                                                                                                              <  8:275055/97‑1 (MQ=255)
                                                                                         ggCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTgg                                                                                                              >  7:275055/1‑97 (MQ=255)
                                                                                          gCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAgc                                                           <  7:85246/147‑1 (MQ=255)
                                                                                           cAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGc                                                                                                                               >  2:165584/1‑78 (MQ=255)
                                                                                            aGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGGCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCt                                                       <  8:142206/149‑1 (MQ=255)
                                                                                                acgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 >  1:38246‑M1/53‑87 (MQ=255)
                                                                                                acgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 <  2:38246‑M1/35‑1 (MQ=255)
                                                                                                        cAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCAGCACAGGCCGTTGACTTCACCGGCCTAGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTgg                                                                       >  7:52257/1‑121 (MQ=255)
                                                                                                                 gACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATAc                                  >  1:46161/1‑149 (MQ=255)
                                                                                                                 gACATCGGGTGGTGCCTGTTGCACCGTGACCGCGCGGCACAGGCAGTTGACTTCGCCGGCCTGGGCATTGTGGTTGTAGATTTTCAAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGTGTACGCCGATAc                                  >  2:189289/1‑149 (MQ=255)
                                                                                                                      caagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGt                                                                                                             >  7:299077‑M1/31‑69 (MQ=255)
                                                                                                                      caagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGt                                                                                                             <  8:299077‑M1/39‑1 (MQ=255)
                                                                                                                            gtgCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTAt                       >  6:221086/1‑149 (MQ=255)
                                                                                                                             tgCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTAtt                      >  5:65618/1‑149 (MQ=255)
                                                                                                                               ccTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCg                    >  8:328145/1‑149 (MQ=255)
                                                                                                                                 tGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCg                    >  4:328062/1‑147 (MQ=255)
                                                                                                                                 tGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCg                    <  3:328062/147‑1 (MQ=255)
                                                                                                                                  gTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACAGGAAGTACTGGCAGGCGGAAAGCGCCTCAACGATGAGTACGCCGAGACGCGAGTCGTCTTCGgtg                 >  2:262731/1‑149 (MQ=255)
                                                                                                                                      cACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAg              >  4:63489/1‑148 (MQ=255)
                                                                                                                                      cACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAg              <  5:221086/148‑1 (MQ=255)
                                                                                                                                      cACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGc             <  6:65618/149‑1 (MQ=255)
                                                                                                                                       aCCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAg              >  5:363733/1‑147 (MQ=255)
                                                                                                                                       aCCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCa            <  5:128558/149‑1 (MQ=255)
                                                                                                                                             accacaaGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTc      <  6:32516‑M1/142‑1 (MQ=255)
                                                                                                                                                 cgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTgg  <  2:46161/149‑1 (MQ=255)
                                                                                                                                                 cgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTgg  <  7:328145/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
AGGTTGGGGTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGG  >  NC_002947/3359792‑3360085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.