New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4613812	51 (0.970)	4 (0.080)	4/234	NT	9.0%	coding (183/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	= 4613881	34 (0.700)					coding (252/4593 nt)	PP_4085	rhs family protein

TTCATCCATCGCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGATCCCTACGGAAAAATCGAGA  >  NC_002947/4613673‑4613957                                                                                                                                            |                                                                                                                                                  ttcATCCATCGCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATcgccg                                                                                                                                            >  1:46352/1‑147 (MQ=255)    atccatcGCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTc                                                                                                                                       >  4:7083/1‑149 (MQ=255)       catcGCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTcgcg                                                                                                                                    >  6:328919/1‑149 (MQ=255)        atcGCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCgg                                                                                                                                   <  4:38008/149‑1 (MQ=255)           gCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATcgccg                                                                                                                                            >  8:176968/1‑137 (MQ=255)           gCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATcgccg                                                                                                                                            <  7:176968/137‑1 (MQ=255)           gCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgt                                                                                                                                 <  2:46352/148‑1 (MQ=255)            cTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               <  3:7083/149‑1 (MQ=255)            cTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               <  5:202025/149‑1 (MQ=255)            cTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               <  5:323131/149‑1 (MQ=255)             ttGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtg                                                                                                                                >  6:39790/1‑147 (MQ=255)             ttGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtg                                                                                                                                <  5:39790/147‑1 (MQ=255)                 cgatGAAATGATCAGCGCAGTTGCCGAGGACGTTATATATGCAGCCGCCACCGCGCCCTTCGCCGCAGCCATCAGCTTGGAAGTGGTAGGCACCGTAGCAACTGGCGGTACGGATGGCGTCGAAATCGCAGCAGTCGCGGgtgttt                                                                                                                             >  4:290427/4‑144 (MQ=255)                 cGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTgg                                                                                                                             <  3:290427/146‑1 (MQ=255)                      aaaTGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCg                                                                                                                       <  3:205727/147‑1 (MQ=255)                      aaaTGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCg                                                                                                                       >  8:312020/1‑147 (MQ=255)                      aaaTGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCg                                                                                                                       >  8:144357/1‑147 (MQ=255)                       aaTGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAg                                                                                                                    <  2:50300/149‑1 (MQ=255)                           aTCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGt                                                                                                                <  7:144357/149‑1 (MQ=255)                           aTCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGt                                                                                                                <  7:312020/149‑1 (MQ=255)                              aGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGa                                                                                                              <  2:147497/148‑1 (MQ=255)                               gcgcAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGc                                                                                                            >  5:193041/1‑149 (MQ=255)                                        ccGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTcc                                                                                                   <  1:154310/149‑1 (MQ=255)                                         cGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCg                                                                                                  >  2:171089/1‑149 (MQ=255)                                          gAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCa                                                                                                                                                  >  8:200191/1‑100 (MQ=255)                                          gAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCa                                                                                                                                                  <  7:200191/100‑1 (MQ=255)                                               cGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGACACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               <  6:40389/114‑1 (MQ=255)                                               cGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGACACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               >  5:40389/1‑114 (MQ=255)                                                gTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCg                                                                                            >  7:134696/1‑148 (MQ=255)                                                  tATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgc                                                                                          >  7:54616‑M1/1‑91 (MQ=255)                                                   aTCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGc                                                                                             >  5:189796/1‑144 (MQ=255)                                                   aTCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGc                                                                                             <  6:189796/144‑1 (MQ=255)                                                        tGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCTGTCGGCGAAGACCAGa                                                                                   <  8:217557/149‑1 (MQ=255)                                                        tGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGa                                                                                   <  5:267860/149‑1 (MQ=255)                                                            gCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGt                                                                               >  3:237804/1‑149 (MQ=255)                                                            gCGGCAACCGCGCCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTACCGTCGGCGAAGACCAGACTgg                                                                               >  2:148995/1‑148 (MQ=255)                                                                 cACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCggcg                                                                          >  4:237804‑M2/1‑145 (MQ=255)                                                                  aCCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCggcga                                                                         <  6:41936‑M2/149‑6 (MQ=255)                                                                    cgcgGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               <  1:344072/93‑1 (MQ=255)                                                                    cgcgGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGgtgt                                                                                                                               >  2:344072/1‑93 (MQ=255)                                                                      cgGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCggcgacgcc                                                                     >  1:276254‑M2/1‑140 (MQ=255)                                                                         ccGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCAtc                                                                  <  8:134696/149‑1 (MQ=255)                                                                         ccGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCAt                                                                   >  8:236797/1‑148 (MQ=255)                                                                          cGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgcgactgcggcgatggcgacgccagcc                                                                 <  8:54616‑M1/149‑83 (MQ=255)                                                                                     ccATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGc                                                      <  7:236797/149‑1 (MQ=255)                                                                                     ccATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGc                                                      <  5:41936/149‑1 (MQ=255)                                                                                       aTCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGa                                                    >  5:262765/1‑149 (MQ=255)                                                                                           gCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCttt                                                         <  2:333761/140‑1 (MQ=255)                                                                                           gCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCttt                                                         >  1:333761/1‑140 (MQ=255)                                                                                                 ccGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTg                                                       <  6:187511/136‑1 (MQ=255)                                                                                                 ccGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTg                                                       >  5:187511/1‑136 (MQ=255)                                                                                                 ccGAGGTTGGCACCGTAGCCACTGGAGGTGCCGCTGGCGTCGCCATCGCCGCAGACGCCGGTGTGGCAGTACGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTCTCGTCCACGCACTCTCCAGCTTATGCGACAGCCTTgg                                           >  8:117952/1‑148 (MQ=255)                                                                                                   gTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCaa                                        >  7:193593/1‑149 (MQ=255)                                                                                                           cACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgcgactgcggcgatggcgacgccag                                                                   >  4:262114‑M1/1‑34 (MQ=255)                                                                                                           cACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgcgactgcggcgatggcgacgccag                                                                   <  3:262114‑M1/114‑81 (MQ=255)                                                                                                             ccGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGAc                              >  2:60577/1‑149 (MQ=255)                                                                                                                  gCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGATCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGc                          <  8:193593/148‑1 (MQ=255)                                                                                                                     aCTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGa                      >  5:204926/1‑149 (MQ=255)                                                                                                                            gTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGATCCCTAc               <  6:262765/149‑1 (MQ=255)                                                                                                                                ggCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCggcgacgccagccgcaccgccagtggctacggtgccaaccacggccaagctgatggctgcggcgacg           <  8:54616‑M2/149‑68 (MQ=255)                                                                                                                                  cTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCggcgacgccagccgcaccgccagtggctacggtg                                            >  4:262114‑M2/1‑80 (MQ=255)                                                                                                                                  cTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCggcgacgccagccgcaccgccagtggctacggtg                                            <  3:262114‑M2/114‑35 (MQ=255)                                                                                                                                    ggCGTCGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgcgactgcggcgatggcgacgccagccgcaccgccagtggctacggtgccaaccacggccaagctgatggctgcggcgacggccg       >  1:276254‑M1/1‑9 (MQ=255)                                                                                                                                     gCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGATCCCTACGGAAAAATc      <  1:171089/149‑1 (MQ=255)                                                                                                                                        tCGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgcgactgcggcgatggcgacgccagccgcaccgccagtggctacggtgccaaccacggccaagctgatggctgcggcgacggccgcggt   <  6:41936‑M1/149‑145 (MQ=255)                                                                                                                                         cGCCgacagtctggtcttcgccgacggaaagggtgctcactgctccgactgccacacccgcgactgcggcgatggcgacgccagccgcaccgccagtggctacggtgccaaccacggccaagctgatggctgcggcgacggccgcggtg  >  4:237804‑M1/1‑4 (MQ=255)                                                                                                                                           ccATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGATCCCTACGGAAAAATCga    >  8:113865/1‑145 (MQ=255)                                                                                                                                           ccATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGATCCCTACGGAAAAATCga    <  7:113865/145‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                  TTCATCCATCGCTTGCCGCTGAAATGATCAGCGCAGTTGCCGAGGCCGTTATCTATGCAGCGGCCACCGCGGCCGTCGCCGCAGCCATCAGCTTGGCCGTGGTTGGCACCGTAGCCACTGGCGGTGCGGCTGGCGTCGCCATCGCCGCAGTCGCGGGTGTGGCAGTCGGAGCAGTGAGCACCCTTTCCGTCGGCGAAGACCAGACTGTCGGCGACGCCATCTCCAGCTTTTGCGACAGCCTTGGCAACAGCGTGGACTCGCCCGATCCCTACGGAAAAATCGAGA  >  NC_002947/4613673‑4613957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.