| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4683186 | 38 (0.720) | 6 (0.140) | 6/210 | NT | 14.7% | intergenic (+45/‑176) | mltD/PP_4146 | membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 4683234 | 38 (0.870) | intergenic (+93/‑128) | mltD/PP_4146 | membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein | |||||
CAAGCGCTTCAATGTGGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTGTACTCGATCAAAG > NC_002947/4683039‑4683334 | cAAGCGCTTCAATGTGGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCTGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGACGTTACAGGGGCTGATTTGCA‑GCCGATTCGCCGGCAcgcccgcc > 2:85775/1‑149 (MQ=255)cAAGCGCTTCAATGTGGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCTGGCAcgcccgcc > 3:218071/1‑149 (MQ=255) aGCGCTTCAATGTGGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGcccc < 8:125416/149‑1 (MQ=255) ttCAATGTGGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCagag > 3:60121/1‑149 (MQ=255) tgGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGttttt > 3:197868/1‑148 (MQ=255) gAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTca > 6:239312/1‑148 (MQ=255) aaGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTcc < 4:197868/148‑1 (MQ=255) ccgatctaaGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCa < 7:287549/142‑1 (MQ=255) aaGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCTGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCg < 4:218071/148‑1 (MQ=255) aaGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCg < 7:156736/148‑1 (MQ=255) aGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCTGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGgt < 1:85775/149‑1 (MQ=255) aGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCa > 8:287549/1‑141 (MQ=255) aGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGgt < 5:96963/149‑1 (MQ=255) cgcTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGgtgt < 4:295640/149‑1 (MQ=255) ggAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaa > 3:197850‑M1/1‑110 (MQ=255) ccACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctct > 8:158739‑M1/1‑105 (MQ=255) ccACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCaga < 2:315351/112‑1 (MQ=255) ccACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCaga > 1:315351/1‑112 (MQ=255) ccACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCtgt > 7:96039/1‑149 (MQ=255) cGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgg < 7:158739‑M1/149‑53 (MQ=255) gCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggc < 4:197850‑M1/149‑55 (MQ=255) aCGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtg < 2:2922‑M2/149‑10 (MQ=255) cTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgc > 1:2922‑M2/1‑135 (MQ=255) tGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCaa < 2:330575/94‑1 (MQ=255) tGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCaa > 1:330575/1‑94 (MQ=255) gTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCAc > 4:86369/1‑149 (MQ=255) aCCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggc > 7:305972‑M2/1‑107 (MQ=255) aCCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggc < 8:305972‑M2/129‑23 (MQ=255) gtggggcgtTGAGTCGTTACAGGGGCTGCTTTTCAGGCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctg < 4:288790‑M1/141‑87 (MQ=255) cTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTTCAGGCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtatat > 3:288790‑M1/1‑58 (MQ=255) tCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCACCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCAc > 7:4962/1‑142 (MQ=255) tCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCACCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCAc < 8:4962/142‑1 (MQ=255) cGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggc > 7:265950‑M2/1‑103 (MQ=255) cGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggc < 8:265950‑M2/125‑23 (MQ=255) gggCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAAcc < 8:96039/149‑1 (MQ=255) ggCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAAccc < 3:86369/149‑1 (MQ=255) gCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAAccc > 8:166989/1‑148 (MQ=255) gTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAg > 4:304761/1‑149 (MQ=255) atatacaGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggcctgaaaagcagcccctgtaacgactcaacgcccgag > 3:288790‑M2/4‑91 (MQ=255) gTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCctctc < 8:267539/149‑1 (MQ=255) ttACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCATGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCctctct > 3:46290/1‑149 (MQ=255) ttACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgc < 4:75428‑M2/103‑15 (MQ=255) ttACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgc > 3:75428‑M2/1‑89 (MQ=255) cAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggcctgaaaagcagcccctgtaacgactcaacgccccac < 4:288790‑M2/144‑59 (MQ=255) cAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCttt < 7:166989/148‑1 (MQ=255) aGGGGCTGCTTTGCA‑GCCCATTCGCGGGCATGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCttttt < 4:46290/149‑1 (MQ=255) ggggCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTc < 5:239312/149‑1 (MQ=255) gggCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTc > 1:177856/1‑148 (MQ=255) tttGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCctct > 7:103113/1‑134 (MQ=255) tttGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCctct < 8:103113/134‑1 (MQ=255) cA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCaa < 3:304761/149‑1 (MQ=255) a‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAg < 5:77124/149‑1 (MQ=255) gCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccgaggt > 7:305972‑M1/1‑22 (MQ=255) gCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccgaggt < 8:305972‑M1/129‑108 (MQ=255) gCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccg > 7:265950‑M1/1‑22 (MQ=255) gCCCATTCGCGGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccg < 8:265950‑M1/125‑104 (MQ=255) cccATTCGCGGGTACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggc > 5:361344‑M2/1‑69 (MQ=255) cccATTCGCGGGTACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggc < 6:361344‑M2/75‑7 (MQ=255) cccATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTACTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCt < 1:128058/149‑1 (MQ=255) gcgGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccgaggtagacggtcagggtctggcctggcttgag > 1:2922‑M1/1‑14 (MQ=255) gcgGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaa > 3:75428‑M1/1‑14 (MQ=255) gcgGGCACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaa < 4:75428‑M1/103‑90 (MQ=255) gcgGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTg > 3:150422/1‑149 (MQ=255) cACGCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccgaggtagacggtcagggtctggcctggcttgagggcgt < 2:2922‑M1/149‑141 (MQ=255) aCGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCt > 3:217838/1‑136 (MQ=255) aCGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCt < 4:217838/136‑1 (MQ=255) cgcccgccCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTGTACTCGa < 2:177856/149‑1 (MQ=255) gcccgcccCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccgaggtagacggtcagggtctggcctggcttgagggcgtggc < 4:197850‑M2/149‑96 (MQ=255) gCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtacccgcgaatggg > 5:361344‑M1/1‑6 (MQ=255) gCCCGCtcccacaggtacgacaccggctttgaggactgtgaaaaacctctgggggcgggcgtacccgcgaatggg < 6:361344‑M1/75‑70 (MQ=255) ccgcccCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAgcgggcgtgcccgcgaatgggctgcaaagcagcccctgtaacgactcaacgcccgaggtagacggtcagggtctggcctggcttgagggcgtggccg < 7:158739‑M2/149‑98 (MQ=255) ccgcccCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTGTACTCGATc > 2:83746/1‑148 (MQ=255) cccccAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTGTACTCGATCAAAg < 1:83746/149‑1 (MQ=255) | CAAGCGCTTCAATGTGGAAATGAAGCACCTCAAGCGCTGGAACCCACGCAGCGGCCACGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCGTTGAGTCGTTACAGGGGCTGCTTTGCA‑GCCCATTCGCGGGCACGCCCGCCCCCAGAGGTTTTTCACAGTCCTCAAAGCCGGTGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCTGAAAACCCAGCCACTGGAAAACCCTAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTGTACTCGATCAAAG > NC_002947/4683039‑4683334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |