New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5129142 =53 (1.000)3 (0.060) 3/238 NT 6.0% intergenic (‑38/+114) PP_4515/recQ MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase
?NC_002947 5129184 = 44 (0.890)intergenic (‑80/+72) PP_4515/recQ MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase

CAGGTTGAGCCCGGCCAGGCGGCGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGC  >  NC_002947/5129003‑5129285
                                                                                                                                              |                                                                                                                                               
cAGGTTGAGCCCGGCCAGGCGGCGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCAtgcc                                                                                                                                        <  8:316870/149‑1 (MQ=255)
        gCCCGGCCAGGCGGCGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTa                                                                                                                                >  1:64224/1‑149 (MQ=255)
         cccGGCCAGGCGGCGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTAc                                                                                                                               <  7:290630/149‑1 (MQ=255)
          ccGGCCAGGCGGCGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTAc                                                                                                                               >  8:135983/1‑148 (MQ=255)
                 ggcggcGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAg                                                                                                                       >  2:282536/1‑149 (MQ=255)
                  gcggcgGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAgg                                                                                                                      >  3:144641/1‑149 (MQ=255)
                       ggTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCgg                                                                                                                 >  1:126809/1‑149 (MQ=255)
                           cAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCAt                                                                                                             <  4:144641/149‑1 (MQ=255)
                            aGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATg                                                                                                            >  5:78914/1‑149 (MQ=255)
                             gCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCAtgac                                                                                                                                        >  6:348968/1‑118 (MQ=255)
                                    gcgcgcagcactggcggcggaattcgaattgtaaacgcatgcaggatcgaaggcagaagcgccatctgctgacctttgtcatgctttttgacgattatcgaacgcgTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTAc                                                                                                       >  3:295645‑M1/107‑149 (MQ=255)
                                    aCGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTAcgcg                                                                                                    >  5:69310/1‑149 (MQ=255)
                                     cGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGt                                                                                                   <  2:126809/149‑1 (MQ=255)
                                       ccAACCTCGGGGCATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTc                                                                                                 >  3:191267/1‑149 (MQ=255)
                                               gggACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                          <  2:109286/148‑1 (MQ=255)
                                               gggAAATCTGGGCCAGTTGCATGCCCAAGCGGTGTTGGTTGTCGGTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                          <  6:206142/148‑1 (MQ=255)
                                                 taaaTCTGGCCCAGTTGAATCCAAAAGGGGTGTTGGTTGCCGTTACGGGGAATAAGTAACTAAATGGATTTTTCCTCCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                          <  1:282536/146‑1 (MQ=255)
                                                 gACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGt                                                                                        >  8:132424/1‑148 (MQ=255)
                                                 gACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTc                                                                                       <  7:135983/149‑1 (MQ=255)
                                                    aTCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                          >  2:5030/1‑143 (MQ=255)
                                                    aTCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                          <  1:5030/143‑1 (MQ=255)
                                                    aTCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCaa                                                                                     >  5:35487/1‑148 (MQ=255)
                                                         ggCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCa                                                                               >  2:198769/1‑149 (MQ=255)
                                                          ttcgaattgtaaacgcatgcaggatcgaaggcagaagcgccatctgctgacctttgtcatgctttttgacgattatcgaacgcgTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATgg                                                                                                           >  3:216229‑M1/85‑123 (MQ=255)
                                                          ttcgaattgtaaacgcatgcaggatcgaaggcagaagcgccatctgctgacctttgtcatgctttttgacgattatcgaacgcgTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATgg                                                                                                           <  4:216229‑M1/39‑1 (MQ=255)
                                                          gCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                              <  6:69310/149‑1 (MQ=255)
                                                          gCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                              <  6:35487/149‑1 (MQ=255)
                                                          gCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                              <  1:198769/149‑1 (MQ=255)
                                                             aGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCa                                                                               <  7:251910/145‑1 (MQ=255)
                                                             aGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCa                                                                               >  8:251910/1‑145 (MQ=255)
                                                                 gCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGa                                                                                                                             <  8:79377/95‑1 (MQ=255)
                                                                 gCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGa                                                                                                                             >  7:79377/1‑95 (MQ=255)
                                                                      ccAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTcag                                                                  <  6:54259/149‑1 (MQ=255)
                                                                       cAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTc                                                                    >  1:215641/1‑146 (MQ=255)
                                                                       cAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTc                                                                    <  2:215641/146‑1 (MQ=255)
                                                                              gtgtTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                              <  1:132296/129‑1 (MQ=255)
                                                                              gtgtTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                              >  2:132296/1‑129 (MQ=255)
                                                                                     ttgTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTcagc                                                                 <  1:69586/135‑1 (MQ=255)
                                                                                     ttgTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTcagc                                                                 >  2:69586/1‑135 (MQ=255)
                                                                                          gTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGc                                                  >  4:163669/1‑145 (MQ=255)
                                                                                          gTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGc                                                  <  3:163669/145‑1 (MQ=255)
                                                                                          gTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTc                                              >  4:225777/1‑149 (MQ=255)
                                                                                               ggggCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATcc                                         >  4:18693/1‑149 (MQ=255)
                                                                                                gggCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCt                                        <  2:64224/149‑1 (MQ=255)
                                                                                                 ggCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTg                                       <  6:78914/149‑1 (MQ=255)
                                                                                                  gCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTg                                       >  8:159209/1‑148 (MQ=255)
                                                                                                   cATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCt                                        <  4:75054/146‑1 (MQ=255)
                                                                                                   cATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCt                                        >  3:75054/1‑146 (MQ=255)
                                                                                                    aTAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCAt                                    <  3:18693/149‑1 (MQ=255)
                                                                                                    aTAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCAt                                    <  7:159209/149‑1 (MQ=255)
                                                                                                          aaCTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGttt                              <  7:132424/149‑1 (MQ=255)
                                                                                                           aCTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTa                             <  3:225777/149‑1 (MQ=255)
                                                                                                                  ggA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTc                       >  4:268898/1‑148 (MQ=255)
                                                                                                                          gATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGa                                            >  2:228490/1‑121 (MQ=255)
                                                                                                                            tCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAg                                                                       <  6:57438/92‑1 (MQ=255)
                                                                                                                               tAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTccgccg            >  2:217390/1‑149 (MQ=255)
                                                                                                                                         gCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAAtt                        <  1:321580/127‑1 (MQ=255)
                                                                                                                                         gCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGtgctgc  >  5:222638/1‑149 (MQ=255)
                                                                                                                                         gCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCCATCCTGCATGCGTTTACAAtt                        >  2:321580/1‑127 (MQ=255)
                                                                                                                                              |                                                                                                                                               
CAGGTTGAGCCCGGCCAGGCGGCGGTCCAGCTCGGCACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGATCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGC  >  NC_002947/5129003‑5129285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.