New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5129142 =	53 (1.000)	3 (0.060)	3/238	NT	6.0%	intergenic (‑38/+114)	PP_4515/recQ	MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase
	?	NC_002947	5129184 =	44 (0.890)					intergenic (‑80/+72)	PP_4515/recQ	MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase

ACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATAGAGTACGCCCTCC  >  NC_002947/5129039‑5129310                                                                                                                                                     |                                                                                                                               gcgcgcagcactggcggcggaattcgaattgtaaacgcatgcaggatcgaaggcagaagcgccatctgctgacctttgtcatgctttttgacgattatcgaacgcgTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTAc                                                                                                                                >  3:295645‑M1/107‑149 (MQ=255) aCGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTAcgcg                                                                                                                             >  5:69310/1‑149 (MQ=255)  cGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGt                                                                                                                            <  2:126809/149‑1 (MQ=255)    ccAACCTCGGGGCATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTc                                                                                                                          >  3:191267/1‑149 (MQ=255)            gggACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                                                   <  2:109286/148‑1 (MQ=255)            gggAAATCTGGGCCAGTTGCATGCCCAAGCGGTGTTGGTTGTCGGTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                                                   <  6:206142/148‑1 (MQ=255)              taaaTCTGGCCCAGTTGAATCCAAAAGGGGTGTTGGTTGCCGTTACGGGGAATAAGTAACTAAATGGATTTTTCCTCCTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                                                   <  1:282536/146‑1 (MQ=255)              gACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGt                                                                                                                 >  8:132424/1‑148 (MQ=255)              gACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTc                                                                                                                <  7:135983/149‑1 (MQ=255)                 aTCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                                                   >  2:5030/1‑143 (MQ=255)                 aTCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATc                                                                                                                   <  1:5030/143‑1 (MQ=255)                 aTCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCaa                                                                                                              >  5:35487/1‑148 (MQ=255)                      ggCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCa                                                                                                        >  2:198769/1‑149 (MQ=255)                       gCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                                                       <  6:35487/149‑1 (MQ=255)                       gCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                                                       <  6:69310/149‑1 (MQ=255)                       gCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                                                       <  1:198769/149‑1 (MQ=255)                          aGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCa                                                                                                        <  7:251910/145‑1 (MQ=255)                          aGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCa                                                                                                        >  8:251910/1‑145 (MQ=255)                                   ccAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTcag                                                                                           <  6:54259/149‑1 (MQ=255)                                    cAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTc                                                                                             >  1:215641/1‑146 (MQ=255)                                    cAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTc                                                                                             <  2:215641/146‑1 (MQ=255)                                           gtgtTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                                                       <  1:132296/129‑1 (MQ=255)                                           gtgtTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCAt                                                                                                       >  2:132296/1‑129 (MQ=255)                                                  ttgTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTcagc                                                                                          >  2:69586/1‑135 (MQ=255)                                                  ttgTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTcagc                                                                                          <  1:69586/135‑1 (MQ=255)                                                       gTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGc                                                                           <  3:163669/145‑1 (MQ=255)                                                       gTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGc                                                                           >  4:163669/1‑145 (MQ=255)                                                       gTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTc                                                                       >  4:225777/1‑149 (MQ=255)                                                            ggggCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATcc                                                                  >  4:18693/1‑149 (MQ=255)                                                             gggCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCt                                                                 <  2:64224/149‑1 (MQ=255)                                                              ggCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTg                                                                <  6:78914/149‑1 (MQ=255)                                                               gCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTg                                                                >  8:159209/1‑148 (MQ=255)                                                                cATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCt                                                                 >  3:75054/1‑146 (MQ=255)                                                                cATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCt                                                                 <  4:75054/146‑1 (MQ=255)                                                                 aTAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCAt                                                             <  3:18693/149‑1 (MQ=255)                                                                 aTAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCAt                                                             <  7:159209/149‑1 (MQ=255)                                                                       aaCTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGttt                                                       <  7:132424/149‑1 (MQ=255)                                                                        aCTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTa                                                      <  3:225777/149‑1 (MQ=255)                                                                               ggA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTc                                                >  4:268898/1‑148 (MQ=255)                                                                                       gAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGa                                                                     >  2:228490/1‑121 (MQ=255)                                                                                         t‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAg                                                                                                <  6:57438/92‑1 (MQ=255)                                                                                            tAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTccgccg                                     >  2:217390/1‑149 (MQ=255)                                                                                                      gCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAAtt                                                 <  1:321580/127‑1 (MQ=255)                                                                                                      gCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGtgctgc                           >  5:222638/1‑149 (MQ=255)                                                                                                      gCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCCATCCTGCATGCGTTTACAAtt                                                 >  2:321580/1‑127 (MQ=255)                                                                                                          gtaaccatggccgagccttgcctcgtagggcagggcatggttaCGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTgcgcgc                       >  3:295645‑M2/44‑149 (MQ=255)                                                                                                             ACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGcgcac                     >  1:217390‑M1/1‑148 (MQ=255)                                                                                                              ccatggccgagccttgcctcgtagggcagggcatggttaCGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGaa                                             >  3:216229‑M2/40‑123 (MQ=255)                                                                                                              ccatggccgagccttgcctcgtagggcagggcatggttaCGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGaa                                             <  4:216229‑M2/84‑1 (MQ=255)                                                                                                              CCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTa                                                      <  6:168898‑M1/114‑1 (MQ=255)                                                                                                              CCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTa                                                      >  5:168898‑M1/1‑114 (MQ=255)                                                                                                              CCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGcgcacgc                   >  6:222638‑M1/1‑149 (MQ=255)                                                                                                              CCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCGGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGcgcacg                    <  3:212611‑M1/148‑1 (MQ=255)                                                                                                                                   aaGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATAGAGTACGCCCTcc  <  6:43823/145‑1 (MQ=255)                                                                                                                                   aaGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATAGAGTACGCCCTcc  >  5:43823/1‑145 (MQ=255)                                                                                                                                        tCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATAGAGTa          >  4:75987/1‑132 (MQ=255)                                                                                                                                        tCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATAGAGTa          <  3:75987/132‑1 (MQ=255)                                                                                                                                          ggCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATagag            >  2:294553/1‑128 (MQ=255)                                                                                                                                          ggCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATagag            <  1:294553/128‑1 (MQ=255)                                                                                                                                                     |                                                                                                                               ACGCCAACCTCGGGACATCTGGGCCAGTTGCATGCCAAAGCGGTGTTGGTTGTCGTTCAGGGGCATAAGGAACTCATTGGA‑‑GTAGAT‑CTAATTATTAGGCAGCTAACCATGCCCTGCCCTACGAGGCAAGGCTCGGCCATGGTTACGCGTTCGATAATCGTCAAAAAGCATGACAAAGGTCAGCAGATGGCGCTTCTGCCTTCGATCCTGCATGCGTTTACAATTCGAATTCCGCCGCCAGTGCTGCGCGCACGCAATAGAGTACGCCCTCC  >  NC_002947/5129039‑5129310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.