New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5441495	68 (1.290)	7 (0.140)	5/238	NT	9.9%	coding (1089/1653 nt)	PP_4780	acyl‑CoA dehydrogenase
	?	NC_002947	= 5441532	64 (1.290)					coding (1052/1653 nt)	PP_4780	acyl‑CoA dehydrogenase

CCACATAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCA  >  NC_002947/5441350‑5441643                                                                                                                                                  |                                                                                                                                                      ccACATAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCC                                                                                                                                                       <  1:312696‑M1/146‑1 (MQ=255)      tAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATgcgc                                                                                                                                                 >  3:61255/1‑147 (MQ=255)      tAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATgcgc                                                                                                                                                 >  8:180363/1‑147 (MQ=255)       aaCCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagc                                                                                                                                               >  8:176660‑M1/1‑140 (MQ=255)       aaCCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGC‑AAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGc                                                                                                                                             >  2:104001/1‑149 (MQ=255)         cccGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCt                                                                                                                                            >  8:61056/1‑149 (MQ=255)          ccGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTc                                                                                                                                           <  2:333477/149‑1 (MQ=255)             cgcCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAgg                                                                                                                                        <  5:63737/149‑1 (MQ=255)             cgcCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAgg                                                                                                                                        <  7:61056/149‑1 (MQ=255)                 aCCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagcgaggctgcgct                                                                                                                                    >  4:98977‑M1/1‑130 (MQ=255)                       gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgc                                                                                                                                  <  8:89784/145‑1 (MQ=255)                       gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgc                                                                                                                                  >  3:159740/1‑145 (MQ=255)                       gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgc                                                                                                                                  <  4:159740/145‑1 (MQ=255)                       gCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAgc                                                                                                                                  >  7:89784/1‑145 (MQ=255)                             ggcggcCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCg                                                                                                                         <  1:222539/148‑1 (MQ=255)                               cggcCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCtt                                                                                                                      <  3:116161/149‑1 (MQ=255)                                 gcCTCCTTGTTCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGTGCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTc                                                                                                                    <  7:136165/149‑1 (MQ=255)                                  ccTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTc                                                                                                                    >  1:188110/1‑148 (MQ=255)                                  ccTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTc                                                                                                                    >  2:178467/1‑148 (MQ=255)                                    tCGTTGATCATGGCCGGCGCACGTTTGAACATCCAGAACTTGCCCACCGCCGTGACCACCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTCGCCCAGGACCAAGCTCAGGGCCAGCGCAGCCTCGCTTTCCAg                                                                                                                 <  6:256082‑M2/149‑2 (MQ=255)                                      gTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAg                                                                                                                 >  2:188110‑M2/1‑146 (MQ=255)                                       ttGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                >  1:92686‑M2/1‑145 (MQ=255)                                       ttGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                <  2:92686‑M2/147‑3 (MQ=255)                                          aTCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagcgaggctgcgctcgccctgagcttgcgcatgggccag                                                                                                           <  3:98977‑M1/149‑45 (MQ=255)                                          aTCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagcgaggctgcgctcgccctgagcttgcgcatgggccag                                                                                                           <  7:176660‑M1/149‑45 (MQ=255)                                             aTGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagcgaggctgcgctcgccctgagcttgcgcatgggccaggc                                                                                                         <  7:6648‑M1/148‑47 (MQ=255)                                                 ccGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGc                                                                                                     >  7:83391/1‑148 (MQ=255)                                                  cGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagcgaggctgcgctcgccctgagcttgcgcatgggccag                                                                                                           <  7:258979‑M1/141‑45 (MQ=255)                                                  cGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCtggaaagcgaggctgcgctcgccctgagcttgcgcatgggccag                                                                                                           >  8:258979‑M1/1‑97 (MQ=255)                                                     cgcACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCa                                                                                                >  7:112562/1‑149 (MQ=255)                                                          gTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTGAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTc                                                                                           <  5:256082/149‑1 (MQ=255)                                                          gTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTc                                                                                           <  7:180363/149‑1 (MQ=255)                                                               cAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCa                                                                                       <  2:175244/148‑1 (MQ=255)                                                                 gATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATc                                                                                     >  2:329078/1‑148 (MQ=255)                                                                   tCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATc                                                                                     <  6:189658/146‑1 (MQ=255)                                                                   tCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATc                                                                                     >  5:189658/1‑146 (MQ=255)                                                                    ccAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATg                                                                                 >  3:322274/1‑149 (MQ=255)                                                                       gTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCaa                                                                                                                                               >  1:133993/1‑84 (MQ=255)                                                                       gTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCaa                                                                                                                                               <  2:133993/84‑1 (MQ=255)                                                                       gTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGgct                                                                              <  8:112562/149‑1 (MQ=255)                                                                          cTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGgctgct                                                                           <  4:61255/149‑1 (MQ=255)                                                                           ttGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTc                                                                          >  6:5950/1‑149 (MQ=255)                                                                             gCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGt                                                                        >  6:170274/1‑149 (MQ=255)                                                                                cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                <  6:290835‑M2/106‑3 (MQ=255)                                                                                cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgg                                                                                                                >  5:290835‑M2/1‑104 (MQ=255)                                                                                cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑Ca                                                                    >  4:314582/1‑149 (MQ=255)                                                                                cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑Ca                                                                    >  7:37273/1‑149 (MQ=255)                                                                                 aCCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGTCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAg                                                                   >  4:139912/1‑149 (MQ=255)                                                                                  ccgccgTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAg                                                                   >  2:227595/1‑148 (MQ=255)                                                                                       gTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCAcccg                                                             >  3:188267/1‑149 (MQ=255)                                                                                          aCCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCgg                                                                                                      >  7:38700/1‑106 (MQ=255)                                                                                          aCCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCgg                                                                                                      <  8:38700/106‑1 (MQ=255)                                                                                             aGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCcgcccgcc                                                       <  2:163151/149‑1 (MQ=255)                                                                                                  ggCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCa                                                                                                <  5:162105/104‑1 (MQ=255)                                                                                                  ggCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCa                                                                                                >  6:162105/1‑104 (MQ=255)                                                                                                    cAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTg                                                <  4:188267/149‑1 (MQ=255)                                                                                                     aaaaTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGtt                                                                       >  1:314328/1‑126 (MQ=255)                                                                                                     aaaaTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGtt                                                                       <  2:314328/126‑1 (MQ=255)                                                                                                     aaaaTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGc                                               <  5:170274/149‑1 (MQ=255)                                                                                                       aaTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGc                                                                  <  6:114594/128‑1 (MQ=255)                                                                                                       aaTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGc                                                                  >  5:114594/1‑128 (MQ=255)                                                                                                        aTGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGAt                                            >  8:177723/1‑149 (MQ=255)                                                                                                                 ttGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATgg                                                                                <  1:255602/105‑1 (MQ=255)                                                                                                                 ttGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATgg                                                                                >  2:255602/1‑105 (MQ=255)                                                                                                                 ttGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAt                                   >  2:289164/1‑149 (MQ=255)                                                                                                                 ttGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAt                                   >  8:42516/1‑149 (MQ=255)                                                                                                                    cGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAtg                                  <  1:227595/148‑1 (MQ=255)                                                                                                                      ggTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGAGCAAtggtgg                              >  8:322126/1‑149 (MQ=255)                                                                                                                         cgtcCAGTTGCTCCAGCTCCTGGCCCATTCGGAAGCTCAGGGCGAGCGCAGCGTAGCGGTCCAGGGCCAGGTCGGCCAGCACGTTAGGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGCCCTTTCGATGCGCGCAATGGTGGgcc                           <  8:312225/149‑1 (MQ=255)                                                                                                                          gtcCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGgccg                          >  3:72591/1‑149 (MQ=255)                                                                                                                           tcCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAtggtg                               >  3:213026/1‑143 (MQ=255)                                                                                                                           tcCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAAtggtg                               <  4:213026/143‑1 (MQ=255)                                                                                                                              aGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGCGTGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCAAGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTAGCGATGCGCGCAATGGTGGGCCGCCTg                      >  6:217862/1‑149 (MQ=255)                                                                                                                               gTTGCTCCAGCGCCTGGTCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGc                     <  3:139912/149‑1 (MQ=255)                                                                                                                                   cTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTc                  >  3:229539/1‑148 (MQ=255)                                                                                                                                    tCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACATTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCaa                >  1:102374/1‑149 (MQ=255)                                                                                                                                     ccAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAAc               <  1:178467/149‑1 (MQ=255)                                                                                                                                      cAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGGACGTTCTGCATCAATGGCTGCTCGTT‑CAGCAGCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAAc               <  8:37273/148‑1 (MQ=255)                                                                                                                                       aGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGAcc                                                   <  5:165938/111‑1 (MQ=255)                                                                                                                                       aGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGAcc                                                   >  6:165938/1‑111 (MQ=255)                                                                                                                                          gcCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccat            <  7:6648‑M2/148‑103 (MQ=255)                                                                                                                                          gcCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTg          <  2:102374/149‑1 (MQ=255)                                                                                                                                           ccTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTgg         >  6:160767/1‑149 (MQ=255)                                                                                                                                            cTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgat         <  3:98977‑M2/149‑106 (MQ=255)                                                                                                                                            cTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgat         <  7:176660‑M2/149‑106 (MQ=255)                                                                                                                                            cTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccg                 >  8:258979‑M2/1‑44 (MQ=255)                                                                                                                                            cTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccg                 <  7:258979‑M2/141‑98 (MQ=255)                                                                                                                                              ggCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGgcg       >  1:54196/1‑148 (MQ=255)                                                                                                                                                cccATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGGCAACGCCTGGCGCAt    <  7:177723/149‑1 (MQ=255)                                                                                                                                                 cctggaaagcgaggctgcgctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaa      >  1:92686‑M1/1‑2 (MQ=255)                                                                                                                                                 cctggaaagcgaggctgcgctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaa      <  2:92686‑M1/147‑146 (MQ=255)                                                                                                                                                 cctggaaagcgaggctgcgctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtg                                               <  6:290835‑M1/106‑105 (MQ=255)                                                                                                                                                 cctggaaagcgaggctgcgctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtg                                               >  5:290835‑M1/1‑2 (MQ=255)                                                                                                                                                 ccATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCAt    >  2:46085/1‑148 (MQ=255)                                                                                                                                                 ccATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATc   <  4:322274/149‑1 (MQ=255)                                                                                                                                                  ctggaaagcgaggctgcgctggccctgagcttggtcctgggcgaggcgctggagcaactggacgacccgcaacaggcgcattttgcccgggtggtcacggcggtgggcaagttctggatgttcaaacgtgcgccggccatgatcaacga   <  6:256082‑M1/149‑149 (MQ=255)                                                                                                                                                  ctggaaagcgaggctgcgctcgccctgagcttgcgcatgggccaggcgctggagcaactggacgacccgcaacaggcgcattttgcccggctggtcacggcggtgggcaagtactggatctgcaaacgtgcgccggccatgatcaac     >  2:188110‑M1/1‑1 (MQ=255)                                                                                                                                                  cATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCa  <  5:160767/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CCACATAACCCGCGCCACCCAGGCATTCGGCGGCCTCGTTGATCATGGCCGGCGCACGTTTGCAGATCCAGTACTTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTT‑CAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCA  >  NC_002947/5441350‑5441643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.