New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5663292	77 (1.460)	3 (0.060)	3/246	NT	4.1%	coding (66/1179 nt)	PP_4971	outer membrane‑bound lytic murein transglycolase A
	?	NC_002947	= 5663318	65 (1.270)					coding (92/1179 nt)	PP_4971	outer membrane‑bound lytic murein transglycolase A
Rejected: Frequency below/above cutoff threshold.

TTCGGCCTACGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAA  >  NC_002947/5663144‑5663438                                                                                                                                                     |                                                                                                                                                   ttCGGCCTACGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCG                                                                                                                                                    >  1:254291‑M1/1‑149 (MQ=255)   cGGCCTACGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCG                                                                                                                                                    <  8:288338‑M1/147‑1 (MQ=255)       cTACGCAAATGGGCGGCCAGGAACGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCGCATGACAGGAAGGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTg                                                                                                                                              <  8:288703/149‑1 (MQ=255)        tACGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCG                                                                                                                                                    >  2:318891‑M1/1‑142 (MQ=255)        tACGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCG                                                                                                                                                    <  1:318891‑M1/142‑1 (MQ=255)        tACGCAAATCGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAATACAGGCGCCATCCATCATGTTCGCTCATGCCAGGAATGCACACATGAAATCTGCCCAGCGCCACCTGGCCTTCACACTGACGGTGCTgg                                                                                                                                             >  8:201001/1‑149 (MQ=255)          cGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTgg                                                                                                                                             <  8:41105/147‑1 (MQ=255)             aaaTGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTg                                                                                                                                        >  7:41250/1‑149 (MQ=255)             aaaTGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTg                                                                                                                                        >  3:207780/1‑149 (MQ=255)             aaaTGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTACTGGCTTTg                                                                                                                                        >  7:125629/1‑149 (MQ=255)              aaTGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGc                                                                                                                                       <  4:21570/149‑1 (MQ=255)                tGGGCGGCCTGTATGGCTGCCCCTGGACCAAACACCATTAGCCACATAAAAGAGAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTg                                                                                                                                     <  5:100382/149‑1 (MQ=255)                   gcggcCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGcc                                                                                                                                  >  5:34867/1‑149 (MQ=255)                       ccAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCt                                                                                                                                           >  4:90466/1‑136 (MQ=255)                       ccAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCt                                                                                                                                           <  3:90466/136‑1 (MQ=255)                           tATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCaa                                                                                                                          <  3:71689/149‑1 (MQ=255)                               gCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAAcggc                                                                                                                      >  8:290019‑M2/1‑145 (MQ=255)                                   ccccTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACggcggc                                                                                                                   <  4:207780/148‑1 (MQ=255)                                   ccccTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACggcggc                                                                                                                   <  8:41250/148‑1 (MQ=255)                                         gACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGttgcagccggccagcaaagccagcaccggcagtgtccagg                                                                                                            <  2:254291‑M1/149‑41 (MQ=255)                                         gACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAgcg                                                                                                            >  5:104699/1‑149 (MQ=255)                                           ccAAACACCAATAGCCACAT‑AAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGcc                                                                                                          >  5:336400/1‑148 (MQ=255)                                                 acCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGccc                                                                                                    >  1:249394/1‑149 (MQ=255)                                                 acCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGccc                                                                                                    >  7:61126/1‑149 (MQ=255)                                                  ccAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGttgcagccggccagcaaagccagcaccggcag                                                                                                                    >  8:260030‑M1/1‑100 (MQ=255)                                                  ccAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGttgcagccggccagcaaagccagcaccggcag                                                                                                                    <  7:260030‑M1/132‑33 (MQ=255)                                                  ccAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGccc                                                                                                    >  6:42039/1‑148 (MQ=255)                                                  ccAATAGCCACAT‑AAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGa                                                                                                  <  6:336400/149‑1 (MQ=255)                                                   cAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCg                                                                                                                                 <  7:147301/118‑1 (MQ=255)                                                   cAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCg                                                                                                                                 >  8:147301/1‑118 (MQ=255)                                                   cAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGccc                                                                                                    >  6:66283/1‑147 (MQ=255)                                                   cAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGccc                                                                                                    >  2:146855/1‑147 (MQ=255)                                                          cacaTAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCAc                                                                                           >  4:264187/1‑149 (MQ=255)                                                           acaTAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGcc                                                                                                          >  6:234590/1‑133 (MQ=255)                                                           acaTAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGcc                                                                                                          <  5:234590/133‑1 (MQ=255)                                                           acaTAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACg                                                                                          <  6:104699/149‑1 (MQ=255)                                                             aTAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCt                                                                                        <  5:66283/149‑1 (MQ=255)                                                               aaaaGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGt                                                                                      >  3:299182/1‑149 (MQ=255)                                                                aaaGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACggcggc                                                                                                                   >  5:344505/1‑119 (MQ=255)                                                                aaaGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACggcggc                                                                                                                   <  6:344505/119‑1 (MQ=255)                                                                        gggCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTa                                                                             >  7:275095/1‑149 (MQ=255)                                                                         ggCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTAt                                                                            >  2:288617/1‑149 (MQ=255)                                                                           cgtaCCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACTCTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGTCGGCGAGAGCGCCAAGCGCGAGGCCCACGCTGTCGCCACCTATGc                                                                          <  7:201001/146‑1 (MQ=255)                                                                                cTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTc                                                                                     >  7:202415/1‑133 (MQ=255)                                                                                cTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTc                                                                                     <  8:202415/133‑1 (MQ=255)                                                                                cTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCgg                                                                     >  4:95307/1‑149 (MQ=255)                                                                                     tGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACt                                                                >  1:50547/1‑149 (MQ=255)                                                                                     tGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTACTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACt                                                                <  8:125629/149‑1 (MQ=255)                                                                                      gTTCGCTCATGACTGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACtt                                                               >  1:212380/1‑149 (MQ=255)                                                                                          gCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGa                                                            <  4:299182/148‑1 (MQ=255)                                                                                          gCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGa                                                            <  1:288617/148‑1 (MQ=255)                                                                                            tCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCaa                                                                                                        >  4:216751/1‑102 (MQ=255)                                                                                            tCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCaa                                                                                                        <  3:216751/102‑1 (MQ=255)                                                                                              aTGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGa                                                        <  5:42039/148‑1 (MQ=255)                                                                                               tGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACt                                                      <  6:34867/149‑1 (MQ=255)                                                                                                 aCAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTg                                                                                                                             >  4:170339/1‑76 (MQ=255)                                                                                                 aCAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTg                                                                                                                             <  3:170339/76‑1 (MQ=255)                                                                                                 aCAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGCAAAGACtt                                                     <  1:146855/148‑1 (MQ=255)                                                                                                   aGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTgcc                                                  <  2:50547/149‑1 (MQ=255)                                                                                                           acacaTGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTg                                                    >  8:135998/1‑139 (MQ=255)                                                                                                           acacaTGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTg                                                    <  7:135998/139‑1 (MQ=255)                                                                                                             acaTGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGc                                        >  2:247202/1‑149 (MQ=255)                                                                                                               aTGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGa                                      >  6:167917/1‑149 (MQ=255)                                                                                                                 gAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGAt                                     >  7:282695/1‑148 (MQ=255)                                                                                                                     tCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCg                                                                      >  2:279207/1‑111 (MQ=255)                                                                                                                     tCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCg                                                                      >  2:211316/1‑111 (MQ=255)                                                                                                                     tCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCg                                                                      <  1:279207/111‑1 (MQ=255)                                                                                                                     tCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCg                                                                      <  1:211316/111‑1 (MQ=255)                                                                                                                       tGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCa                                                                                 >  7:218965/1‑98 (MQ=255)                                                                                                                       tGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCa                                                                                 <  8:218965/98‑1 (MQ=255)                                                                                                                         cccTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGAc                               <  8:61126/146‑1 (MQ=255)                                                                                                                         cccTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGAc                               <  2:249394/146‑1 (MQ=255)                                                                                                                         cccTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACct                             <  2:212380/148‑1 (MQ=255)                                                                                                                           cTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACctgct                          >  5:232363/1‑149 (MQ=255)                                                                                                                                 cACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAgg                    >  5:228817/1‑149 (MQ=255)                                                                                                                                 cACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAgg                    >  5:299783/1‑149 (MQ=255)                                                                                                                                   cctggcctggACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCt                  >  8:86445/1‑149 (MQ=255)                                                                                                                                       gcctggACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTa              <  6:228817/149‑1 (MQ=255)                                                                                                                                        cctggACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAAcggcagtgtccaggccaggtggcgcagggcagatttcatgtgtgcattcctgtcatgagcgaacatgaaggttcgcccctgtcttttatgtggctattggtgtttggtc             <  2:254291‑M2/149‑110 (MQ=255)                                                                                                                                         ctggACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATg            >  5:167041/1‑149 (MQ=255)                                                                                                                                           ggACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGaa                                  <  8:105284/125‑1 (MQ=255)                                                                                                                                           ggACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGaa                                  >  7:105284/1‑125 (MQ=255)                                                                                                                                            gACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGcgt         <  5:195034/149‑3 (MQ=255)                                                                                                                                            gACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCa          <  6:232363/148‑1 (MQ=255)                                                                                                                                            gACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCAt         <  3:95307/149‑1 (MQ=255)                                                                                                                                            gACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTAAGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCAt         <  3:264187/149‑1 (MQ=255)                                                                                                                                                cTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAAcggcagtgtccaggccaggtggcgcagggcagatttcatgtgtgcattcctgtcatgagcgaacatgaaggttcgcccctgtcttttatgtggctattgg                      <  7:260030‑M2/132‑101 (MQ=255)                                                                                                                                                cTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAAcggcagtgtccaggccaggtggcgcagggcagatttcatgtgtgcattcctgtcatgagcgaacatgaaggttcgcccctgtcttttatgtggctattgg                      >  8:260030‑M2/1‑32 (MQ=255)                                                                                                                                                 tGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGgcg     >  1:204029/1‑148 (MQ=255)                                                                                                                                                  gCCGttgcagccggccagcaaagccagcaccggcagtgtccaggccaggtggcgcagggcagatttcatgtgtgcattcctgtcatgagcgaacatgaaggttcgcccctgtcttttatgtggctattggtgtttggtccaggggcagc   >  8:290019‑M1/1‑4 (MQ=255)                                                                                                                                                   ccGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCaa  >  5:38702/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TTCGGCCTACGCAAATGGGCGGCCAGTATCGCTGCCCCTGGACCAAACACCAATAGCCACATAAAAGACAGGGGCGAACCTTCATGTTCGCTCATGACAGGAATGCACACATGAAATCTGCCCTGCGCCACCTGGCCTGGACACTGCCGGTGCTGGCTTTGCTGGCCGGCTGCAACGGCGGCGAGAGCGCCAAGCCCGAGCCCCACGCTGTCGCCACCTATGCCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAA  >  NC_002947/5663144‑5663438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.