New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 688301	54 (1.020)	6 (0.120)	6/240	NT	9.8%	coding (1166/1182 nt)	ydgK	Bcr/CflA family multidrug resistance transporter
	?	NC_002947	= 688328	59 (1.180)					coding (7/183 nt)	PP_5446	hypothetical protein

GCGGGTGCTGCGGCGCTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCATCGCTGCATAC  >  NC_002947/688180‑688475                                                                                                                                                     |                                                                                                                                                    gCGGGTGCTGCGGCGCTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGt                                                                                                                                                     >  6:31038/1‑149 (MQ=255)         tgcGGCGCTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAg                                                                                                                                             >  5:72414/1‑149 (MQ=255)          gcggcgCTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGc                                                                                                                                            >  6:130741/1‑149 (MQ=255)             gcgcTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCgg                                                                                                                                         <  3:10301/149‑1 (MQ=255)             gcgcTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCgg                                                                                                                                         <  5:130741/149‑1 (MQ=255)                   gTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCgg                                                                                                                                         <  1:209078/143‑1 (MQ=255)                   gTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCgg                                                                                                                                         >  2:209078/1‑143 (MQ=255)                   gTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTc                                                                                                                                    >  3:215020/1‑148 (MQ=255)                          tACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTgg                                                                                                                            >  7:89188/1‑149 (MQ=255)                            cTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGc                                                                                                                           >  5:212193/1‑148 (MQ=255)                               cATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTc                                                                                                                                    >  8:304796/1‑136 (MQ=255)                               cATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTc                                                                                                                                    <  7:304796/136‑1 (MQ=255)                               cATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGcgac                                                                                                                        >  4:112188/1‑148 (MQ=255)                               cATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGcgac                                                                                                                        <  6:212193/148‑1 (MQ=255)                                 tgatgGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGaa                                                                                                                     >  8:317349/1‑149 (MQ=255)                                 tgatgGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGaa                                                                                                                     <  1:172440/149‑1 (MQ=255)                                  gatgGCAGTGCGGTGCCCATGGCAATCGTGATCAGCGTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTg                                                                                                                             >  4:52428/1‑140 (MQ=255)                                  gatgGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTg                                                                                                                             <  3:52428/140‑1 (MQ=255)                                   atgGCTGTGCGGTGCCCATGGAAATGGTGATCAGCCTGTGGGGGGCGCTGGTGGTCTGTGTTGGGGTGTTGACCGGGGGTTTGCAGGCCATGGCTCCCGAATATGCGGGTGAGGTGCCTGCAGCGGGGTTTCCAGGGTGGCGACGAAg                                                                                                                    <  8:89188/148‑1 (MQ=255)                                    tgGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGgc                                                                                                                  >  6:355426/1‑149 (MQ=255)                                      gCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGgcgc                                                                                                                >  4:282891/1‑149 (MQ=255)                                              gTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCt                                                                                                          >  5:141036/1‑147 (MQ=255)                                              gTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCa                                                                                                        <  5:355426/149‑1 (MQ=255)                                                  ccATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGATGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCt                                                                                                    >  1:51991/1‑149 (MQ=255)                                                    aTGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCg                                                                                                  <  4:215020/149‑1 (MQ=255)                                                    aTGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCg                                                                                                  >  6:173353/1‑149 (MQ=255)                                                         aaTCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGc                                                                                                                                >  8:242976/1‑114 (MQ=255)                                                         aaTCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGc                                                                                                                                <  7:242976/114‑1 (MQ=255)                                                              tGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGACGGCGCGCGCCTCAGCCTCGCTGCGAAAAc                                                                                        >  8:116871/1‑149 (MQ=255)                                                                   aGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGAc                                                                                    <  6:72414/148‑1 (MQ=255)                                                                   aGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGAc                                                                                    <  5:173353/148‑1 (MQ=255)                                                                    gCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACca                                                                                  >  8:251644/1‑149 (MQ=255)                                                                      cTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCAGCATAAGCGGGTGAGGTGCCTGCAGCCggg                                                                                                                                        >  8:119301/1‑93 (MQ=255)                                                                                cgcTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGa                                                                                            >  2:225835/1‑127 (MQ=255)                                                                                     gtggtCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCt                                                                   <  3:282891/147‑1 (MQ=255)                                                                                     gtggtCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCACCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTgg                                                                 <  7:317349/149‑1 (MQ=255)                                                                                        gtCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACt                                                              >  6:220283/1‑149 (MQ=255)                                                                                           aGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGc                                                           >  7:288317/1‑149 (MQ=255)                                                                                               ttGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCaa                                                        <  3:237282/148‑1 (MQ=255)                                                                                               ttGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAg                                                       <  2:51991/149‑1 (MQ=255)                                                                                                         gACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCgg                                              <  7:251644/148‑1 (MQ=255)                                                                                                         gACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACAACATGATGATCGAGCTGGACTTGCCAAGGGCAGGCggg                                             >  6:301840/1‑149 (MQ=255)                                                                                                          aCCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTgcctgcagccgggtcaacagcgcaacactgaccaccagcgccccgcacaggctgatcacgattgccatgggcaccgcactgccatcatgcagtagcccgaccagc                                            <  3:181961‑M2/149‑106 (MQ=255)                                                                                                            ccGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTgcctgcaaacgccgggtcaacagcgcaacactgaccaccagcgccccgcacaggctgatcacgattgccatgggcaccgcactgccatcatgcagtagcccgaccag                                          <  6:313126‑M2/149‑108 (MQ=255)                                                                                                            ccGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGc                                                                             <  5:205438/114‑1 (MQ=255)                                                                                                            ccGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGc                                                                             >  6:205438/1‑114 (MQ=255)                                                                                                              ggCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTc                                        <  5:31038/149‑1 (MQ=255)                                                                                                              ggCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTc                                        <  6:141036/149‑1 (MQ=255)                                                                                                               gCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCg                                       <  8:288317/149‑1 (MQ=255)                                                                                                                cGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCgg                                      <  5:220283/149‑1 (MQ=255)                                                                                                                 gTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGc                                     >  4:61730/1‑149 (MQ=255)                                                                                                                     gCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGa                                 >  8:170409/1‑149 (MQ=255)                                                                                                                       aGGCCAAGGCTCCCGCATAAGCGGGTGAGGTgcctgcaaacgccgggtcaacagcgcaacactgaccaccagcgccccgcacaggctgatcacgattgccatgggcaccgcactgccatcatgcagtagcccgaccagcgccgcagcac                               >  5:313126‑M2/1‑31 (MQ=255)                                                                                                                       aGGCCAAGGCTCCCGCATAAGCGGGTGAGGTgcctgcaaacgccgggtcaacagcgcaacactgaccaccagcgccccgcacaggctgatcacgattgccatgggcaccgcactgccatcatgcagtagcccgaccagcgccgcagcac                               <  2:140078‑M2/149‑119 (MQ=255)                                                                                                                       aGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACg                               >  1:290619/1‑149 (MQ=255)                                                                                                                          ccAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGc                                                    >  8:289466/1‑125 (MQ=255)                                                                                                                          ccAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGc                                                    <  7:289466/125‑1 (MQ=255)                                                                                                                            aaGGCTCCCGCATAAGCGGGTGAGGTgcctgcaaacgccgggtcaacagcgcaacactgaccaccagcgccccgcacaggctgatcacgattgccatgggcaccgcactgccatcatgcagtagcccgaccagcgccgcagcacccgca                          >  1:140078‑M2/1‑26 (MQ=255)                                                                                                                               gCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCgg                                      >  4:239648/1‑134 (MQ=255)                                                                                                                               gCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCgg                                      <  3:239648/134‑1 (MQ=255)                                                                                                                                   ccGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATGGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTc                                        >  1:285366/1‑128 (MQ=255)                                                                                                                                   ccGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAg                                                                     >  3:179717/1‑99 (MQ=255)                                                                                                                                   ccGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAg                                                                     <  4:179717/99‑1 (MQ=255)                                                                                                                                   ccGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTc                                        <  2:288856/128‑1 (MQ=255)                                                                                                                                   ccGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTc                                        <  2:285366/128‑1 (MQ=255)                                                                                                                                   ccGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTc                                        >  1:288856/1‑128 (MQ=255)                                                                                                                                     gCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAAtt                 >  1:14365/1‑149 (MQ=255)                                                                                                                                      cATAAGCGGGTGAGGTgcctgtagccgggtcaacagcgcaacactgaccaccagcgccccgcacaggctgatcacgattgccatgggcaccgcactgccatcatgcagtagcccgaccagcgccgcagcacccgcagctacgctgaact                <  3:17126‑M2/149‑134 (MQ=255)                                                                                                                                          aGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCa             <  7:170409/148‑1 (MQ=255)                                                                                                                                           gCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCATc           >  5:223775/1‑149 (MQ=255)                                                                                                                                             gggTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCATCGc         <  6:223775/149‑1 (MQ=255)                                                                                                                                                tGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCATCGCTGc      <  2:290619/149‑1 (MQ=255)                                                                                                                                                 gAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAgg                                                      >  8:203409/1‑100 (MQ=255)                                                                                                                                                 gAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAgg                                                      <  7:203409/100‑1 (MQ=255)                                                                                                                                                    gTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCATCGCTGCATAc  >  4:45604/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGGGTGCTGCGGCGCTGGTCGGGCTACTGCATGATGGCAGTGCGGTGCCCATGGCAATCGTGATCAGCCTGTGCGGGGCGCTGGTGGTCAGTGTTGCGCTGTTGACCCGGCGTTTGCAGGCCAAGGCTCCCGCATAAGCGGGTGAGGTGCCTGCAGCCGGGTTTCCAGCGTGGCGACGAAGGCGCGCGCCTCAGCCTCGCTGCGAAAACTGACCACATGCTGATCGAGCTGGACTTGCCAAGGGCAGGCGGGGTTTCGGCTCGACGCACTTACGATAATTTTCATCGCTGCATAC  >  NC_002947/688180‑688475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.