New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 809229 = | 57 (1.080) | 4 (0.080) | 4/242 | NT | 7.6% | coding (129/1335 nt) | PP_0695 | hypothetical protein |
? | NC_002947 | 809268 = | 43 (0.850) | coding (90/1335 nt) | PP_0695 | hypothetical protein |
AGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGAT > NC_002947/809122‑809409 | aGGATATCCAGGCGGATCCACACGACGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCa > 7:48735/1‑149 (MQ=255) ggATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAg < 5:322406/149‑1 (MQ=255) tCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTc < 5:298498/149‑1 (MQ=255) gcgaatgcagtacaatcgcccccttattcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctggtcgaaacgctcgcacagcggctcgatcagggcCCAGTGTTCGGCTAgg < 5:117338‑M2/16‑1 (MQ=255) gcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactggGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCgg > 8:308899‑M1/89‑138 (MQ=255) gcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactggGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCgg < 7:308899‑M1/50‑1 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGgcgcg > 6:32456/1‑148 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGgcgcg > 6:219358/1‑148 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCA‑GGCCCAGTGtt < 7:106775/134‑1 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCA‑GGCCCAGTGtt > 8:106775/1‑134 (MQ=255) cTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCAtt < 5:219358/148‑1 (MQ=255) cTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTg > 7:184767/1‑149 (MQ=255) ggggTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCtt < 5:32456/149‑1 (MQ=255) gCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCg > 6:330912/1‑133 (MQ=255) gCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCg < 5:330912/133‑1 (MQ=255) gCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACt > 1:22268/1‑149 (MQ=255) tttCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTc > 6:291125/1‑100 (MQ=255) tttCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTc < 5:291125/100‑1 (MQ=255) tCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCtt > 8:160242/1‑122 (MQ=255) tCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCtt < 7:160242/122‑1 (MQ=255) ctgctgGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCaa < 8:48735/149‑1 (MQ=255) ggCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCAtt < 1:21942/125‑1 (MQ=255) ggCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCAtt > 2:21942/1‑125 (MQ=255) ccACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAggggg < 2:22268/149‑1 (MQ=255) ccACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCAAAGAAAAAggggg > 8:267191/1‑149 (MQ=255) gCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTg > 5:154133/1‑149 (MQ=255) tGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTa > 6:198116/1‑149 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGAtt > 7:170021/1‑144 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGAtt < 8:170021/144‑1 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTg > 7:115368/1‑145 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTg < 8:115368/145‑1 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTAc < 5:198116/148‑1 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACt > 7:111311/1‑149 (MQ=255) gcgcAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACt < 4:183531/149‑1 (MQ=255) cAGTTCGACCAGGCTCAGGGTGCCCGGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGGGTTCGGCTAGGGCGCGCAGGACGCGCGTGGGTTCGATCATTGGCTTCGCCTCGTTGCCAAGAAAAAGGGGGCGAGTGTACTGCa > 3:190646/1‑149 (MQ=255) ttCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAggggg > 3:225682/1‑133 (MQ=255) ttCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAggggg < 4:225682/133‑1 (MQ=255) ttCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACt < 5:343875/143‑1 (MQ=255) ttCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACt > 6:343875/1‑143 (MQ=255) ttCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTc > 1:172875/1‑149 (MQ=255) cctagccgaacactggGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAATAAGGGGGCGATTGTACTGCATTcgc < 5:117338‑M1/133‑1 (MQ=255) aCCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCgg > 5:195333/1‑149 (MQ=255) ccgaacactgggccctgatcgagccgctgtgcgagcgtttcgaccagggcCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGc > 8:308899‑M2/51‑138 (MQ=255) ccgaacactgggccctgatcgagccgctgtgcgagcgtttcgaccagggcCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGc < 7:308899‑M2/88‑1 (MQ=255) aGGGTGCCCTGTGCGAAACGCTCGCACAGCGGCTCGAGCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTGGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGttt < 4:190646/149‑1 (MQ=255) agCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTAc > 8:168159‑M1/3‑148 (MQ=255) CCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAgg > 1:259470‑M1/1‑111 (MQ=255) CCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAgg < 2:259470‑M1/111‑1 (MQ=255) atcgagccgctgtgcgagcgtttcgaccagggcCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTg < 6:117338‑M2/115‑1 (MQ=255) aCGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTgg > 3:61409/1‑62 (MQ=255) aCGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTgg < 4:61409/62‑1 (MQ=255) gCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATga < 6:195333/147‑1 (MQ=255) cacaGCGGCTCGATGAGGGCCCAGTGTTCGGGTAGGGCGCGCTGGACGCGCTTGGGTTCTATCATTGGCTTCGACTCGTTGCCAATAAAAAGGGGGCTATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGaa < 6:154133/149‑1 (MQ=255) aGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAAt > 6:273258/1‑148 (MQ=255) gCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATaa > 6:85655/1‑149 (MQ=255) gATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATggg < 5:273258/149‑1 (MQ=255) aTCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGaa > 7:289279/1‑137 (MQ=255) aTCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGa > 1:167337/1‑149 (MQ=255) tCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGAt < 5:85655/149‑1 (MQ=255) | AGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGAT > NC_002947/809122‑809409 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |