New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1003693	62 (1.170)	4 (0.080)	4/238	NT	7.8%	coding (200/486 nt)	PP_0865	ECF subfamily RNA polymerase sigma‑24 factor
	?	NC_002947	= 1003761	37 (0.750)					coding (268/486 nt)	PP_0865	ECF subfamily RNA polymerase sigma‑24 factor

GAAACCCCGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAGCGCATGGGGTTGAGC  >  NC_002947/1003614‑1003907                                                                                                                                                    |                                                                                                                                                   gAAACCCCGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGAcc                                                                                                                                                    <  2:338726/148‑1 (MQ=255) gAAACCCCGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCc                                                                                                                                                   <  1:132926‑M2/149‑2 (MQ=255) gAAACCCCGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCc                                                                                                                                                   >  6:159367‑M2/1‑148 (MQ=255)  aaaCCCCGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcg                                                                                                                                                  >  4:54236‑M2/1‑147 (MQ=255)     ccccGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcgg                                                                                                                                                 <  8:118841‑M2/147‑4 (MQ=255)      cccGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcggaa                                                                                                                                               >  7:212941‑M2/1‑143 (MQ=255)      cccGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcgg                                                                                                                                                 <  8:212941‑M2/146‑4 (MQ=255)        cgcgcgAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcggaagcc                                                                                                                                            >  2:225825‑M2/1‑141 (MQ=255)         gcgcgAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGACTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCt                                                                                                                                           <  3:157077/149‑1 (MQ=255)               gCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTg                                                                                                                                      >  1:41233/1‑148 (MQ=255)                   gTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACAGGCAGTGGCGACCCGGAAGCCTACGTGCATGc                                                                                                                                 >  5:18052/1‑149 (MQ=255)                    ttGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGcc                                                                                                                                >  6:15956/1‑149 (MQ=255)                       agcagcCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTg                                                                                                                             <  5:15956/149‑1 (MQ=255)                               cgcgCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGc                                                                                                                     <  2:128064/149‑1 (MQ=255)                                  gcCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGt                                                                                                                                       <  5:255152/128‑1 (MQ=255)                                  gcCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGt                                                                                                                                       >  6:255152/1‑128 (MQ=255)                                    cTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACa                                                                                                                <  7:118841/149‑1 (MQ=255)                                    cTACCTGCATCAGGCTGCGCGAAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACa                                                                                                                >  2:242208/1‑149 (MQ=255)                                       ccTGCTTCAGGCTGGGCGCATTCTCGCTGTGGATGGCTTCCGTCGCGTAGACCGGCGCCAGGCCCTGGTGCGGGAAGCCTTCGTAGAAGTCGCAACCGGCAGTGGCGACGCGGAAGCCTACGTGCTTGCCCTGGAGCTGGCCGACAg                                                                                                               <  8:227420/147‑1 (MQ=255)                                              cAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCg                                                                                                      >  3:237756/1‑149 (MQ=255)                                                ggCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCggg                                                                                                    <  2:41233/149‑1 (MQ=255)                                                                gCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGc                                                                                     <  6:18052/148‑1 (MQ=255)                                                                 cTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGc                                                                                             <  8:124478/139‑1 (MQ=255)                                                                 cTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGc                                                                                             >  7:124478/1‑139 (MQ=255)                                                                 cTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCct                                                                                   <  5:120845/149‑1 (MQ=255)                                                                  tgtgGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCctc                                                                                  >  8:4171/1‑149 (MQ=255)                                                                     ggATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcggaagccatccacagcgatattgcgcgcagcctgatgcaggtaggcgcgtggctgctcaacctgctcg                                                                               <  8:51838‑M2/149‑70 (MQ=255)                                                                        tGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcggaagccatccacagcgatattgcgcgcagcctgatgcaggtaggcgcgtggctgctcaacctgctcgcgc                                                                            <  4:151725‑M2/149‑73 (MQ=255)                                                                        tGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGAGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACt                                                                            <  6:177155/149‑1 (MQ=255)                                                                           cTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGcc                                                                         >  5:24362/1‑149 (MQ=255)                                                                            ttCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGc                                                                                     <  8:39583/136‑1 (MQ=255)                                                                            ttCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGc                                                                                     >  7:39583/1‑136 (MQ=255)                                                                            ttCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCg                                                                        >  5:158513/1‑149 (MQ=255)                                                                               cGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCa                                                                     <  7:4171/149‑1 (MQ=255)                                                                                 tCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGc                                                                                                              >  1:172555/1‑106 (MQ=255)                                                                                   gcgAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGgt                                                                  <  1:242208/148‑1 (MQ=255)                                                                                    cgAAGACCGGCGCCTGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGgtgt                                                                <  2:132926/149‑1 (MQ=255)                                                                                      aaGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGtt                                                               >  4:182132/1‑148 (MQ=255)                                                                                      aaGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTc                                                              <  5:153085/149‑1 (MQ=255)                                                                                           cGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCg                                                                                                             <  4:134716/97‑1 (MQ=255)                                                                                           cGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCg                                                                                                             >  3:134716/1‑97 (MQ=255)                                                                                                   ggCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACAGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGc                                                 >  3:211902/1‑149 (MQ=255)                                                                                                              gggAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCcggaagccatccacagcgatattgcgcgcagcctgatgcaggtaggcgcgtggctgctcaagctgctcgcgcggggtttccagtacccggacaaaggcatcgtgggtgag                                      >  3:151725‑M2/1‑39 (MQ=255)                                                                                                                     cTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGc                                         >  2:265301/1‑139 (MQ=255)                                                                                                                     cTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGc                                         <  1:265301/139‑1 (MQ=255)                                                                                                                      ttCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAg                                           <  6:255261/136‑1 (MQ=255)                                                                                                                      ttCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAg                                           >  5:255261/1‑136 (MQ=255)                                                                                                                          aagaagGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGcc                             >  8:88531/1‑146 (MQ=255)                                                                                                                            gaagGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGGGTCAGGccttcga                        <  4:237756/149‑6 (MQ=255)                                                                                                                                 cgcAACCGGCAGTGGCGACCcggaagccatccacagcgatattgcgcgcagcctgatgcaggtaggcgcgtggctgctcaacctgcttgcgcggggtttccagtacccggacaaatgcatcgttgttgaggtcctcggcctgctgacga                   >  7:51838‑M2/1‑20 (MQ=255)                                                                                                                                    aaCCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAgc                >  7:237283/1‑149 (MQ=255)                                                                                                                                      ccGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAgcgc              <  3:182132/149‑1 (MQ=255)                                                                                                                                                cGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAGCGCATGGGGTTGa    <  6:24362/149‑1 (MQ=255)                                                                                                                                                 gACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAGCGCATGGGGTTGAg   >  1:206010/1‑149 (MQ=255)                                                                                                                                                   cccGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGcc                                        <  8:299678/110‑1 (MQ=255)                                                                                                                                                   cccGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGcc                                        >  7:299678/1‑110 (MQ=255)                                                                                                                                                    ccGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAGCGCATGGGGTTGAGc  >  5:226660/1‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GAAACCCCGCGCGAGCAGGTTGAGCAGCCACGCGCCTACCTGCATCAGGCTGCGCGCAATATCGCTGTGGATGGCTTCCGTCGCGAAGACCGGCGCCAGGCCCTGGAGCGGGAAGCCTTCGAAGAAGGCGCAACCGGCAGTGGCGACCCGGAAGCCTACGTGCATGCCCTGGAGCTGGCCGACAGCGTTGAGCGGGCCCTGGCCGAGCTGCCTCTCAACTGCCGGCAGGTGTTCATCTGGCAGAAGCTCGAAGGCCTGACCCAGGCCGAGATTGCCGAGCGCATGGGGTTGAGC  >  NC_002947/1003614‑1003907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.