New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1090127 =	56 (1.060)	3 (0.060)	3/238	NT	5.5%	coding (988/1380 nt)	fumC‑I	class 2 fumarate hydratase
	?	NC_002947	1090165 =	51 (1.030)					coding (1026/1380 nt)	fumC‑I	class 2 fumarate hydratase

TGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAGGTCAACGAAGA  >  NC_002947/1090017‑1090311                                                                                                                                                      |                                                                                                                                                    tGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATc                                                                                                                                                     >  1:135970/1‑149 (MQ=255)   agcaagcggctgacattggccatcagctcgatgctttccagcaggttgcgggcgatcaccggcagcatcacgttcagctcgaagttaccggcttgacctgcgacggcgATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGc                                                                                                                                                   >  3:93211‑M1/109‑149 (MQ=255)      tCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGt                                                                                                                                                >  2:157169/1‑149 (MQ=255)        cGGCCCGCTGGCCGGTCTGGGCTAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCg                                                                                                                                              <  7:187713/149‑1 (MQ=255)            ccGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAgg                                                                                                                                          <  6:304837/149‑1 (MQ=255)             cGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGt                                                                                                                                         >  7:9606/1‑149 (MQ=255)              gCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTc                                                                                                                                        <  1:132519/149‑1 (MQ=255)                  gCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACGCACGCGACCATCGCCGTCGCAGGTCaa                                                                                                                                      <  1:181498/148‑1 (MQ=255)                  gCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCaa                                                                                                                                      <  8:29243/147‑1 (MQ=255)                           ggCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTaa                                                                                                                              <  4:66280/146‑1 (MQ=255)                             cGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTc                                                                                                                          >  4:338950/1‑148 (MQ=255)                                aaTCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑Gc                                                                                                                     >  5:350544/1‑149 (MQ=255)                                  tCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTg                                                                                                                   <  1:157169/149‑1 (MQ=255)                                      gCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACg                                                                                                               >  2:265682/1‑149 (MQ=255)                                        tGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGt                                                                                                              >  2:305552/1‑148 (MQ=255)                                         gCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGa                                                                                                            >  8:307129/1‑149 (MQ=255)                                         gCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGa                                                                                                            >  3:74641/1‑149 (MQ=255)                                            aGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGAtgc                                                                                                         >  6:141735/1‑149 (MQ=255)                                              ctctGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAAc                                                                                                                             <  6:244562/128‑1 (MQ=255)                                              ctctGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAAc                                                                                                                             >  5:244562/1‑128 (MQ=255)                                                 tGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCg                                                                                                    >  6:209187/1‑149 (MQ=255)                                                    aGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGt                                                                                                  >  3:297090/1‑148 (MQ=255)                                                    aGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGt                                                                                                  >  1:299770/1‑148 (MQ=255)                                                          gCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGcc                                                                                           >  2:436/1‑149 (MQ=255)                                                           ctctTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGccc                                                                                          <  5:209187/149‑1 (MQ=255)                                                            tctTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTTGCAGGTCAAGCCGGTAACTTCGA‑GCTGa                                                                                                                  >  5:290791/1‑124 (MQ=255)                                                            tctTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTTGCAGGTCAAGCCGGTAACTTCGA‑GCTGa                                                                                                                  <  6:290791/124‑1 (MQ=255)                                                            tctTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGccc                                                                                          >  8:283678/1‑148 (MQ=255)                                                             ctTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGCCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCg                                                                                         >  2:286734/1‑148 (MQ=255)                                                              ttCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGccc                                                                                          <  7:283678/146‑1 (MQ=255)                                                              ttCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGc                                                                                        >  1:130775/1‑148 (MQ=255)                                                                cGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGc                                                                                        <  6:350544/146‑1 (MQ=255)                                                                 gATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAAc                                                                                     <  4:297090/148‑1 (MQ=255)                                                                     aTGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACctgc                                                                                 <  8:297156/148‑1 (MQ=255)                                                                      tGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACctgctg                                                                               >  7:285016/1‑149 (MQ=255)                                                                        ccAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTgg                                                                              <  2:130775/148‑1 (MQ=255)                                                                          aGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGaaa                                                                           <  5:141735/149‑1 (MQ=255)                                                                              aaGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCAt                                                                       <  1:436/149‑1 (MQ=255)                                                                                 gTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATc                                                                      >  5:138825/1‑147 (MQ=255)                                                                                    aaCCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGACTCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGc                                                                  <  1:265682/149‑1 (MQ=255)                                                                                          gTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGc                                                           <  4:74641/149‑1 (MQ=255)                                                                                             aTCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCaa                                                        >  5:299009/1‑149 (MQ=255)                                                                                                 cGGAGGCCAGTGCCATGTTCGCGTAGCATGTGTTTGGCAACG‑ACGCGACCATCTCCGTTGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGc                                                           <  1:135809/142‑1 (MQ=255)                                                                                                 cGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTc                                                    <  3:338950/149‑1 (MQ=255)                                                                                                    aGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGc                                                 <  7:307129/149‑1 (MQ=255)                                                                                                       ccACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGccc                                                                                          <  5:275612/105‑1 (MQ=255)                                                                                                       ccACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGccc                                                                                          >  6:275612/1‑105 (MQ=255)                                                                                                          cTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTg                                           <  2:299770/149‑1 (MQ=255)                                                                                                           tGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTACCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGc                                          >  3:124154/1‑149 (MQ=255)                                                                                                             gcgatggtcgcgtcgttgccaatcacttgggcggcgaccatCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCt                                         >  3:93211‑M2/42‑149 (MQ=255)                                                                                                             ccATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTg                                        >  6:169117/1‑149 (MQ=255)                                                                                                              cgataTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTg                                        >  3:282342‑M1/6‑148 (MQ=255)                                                                                                                atggtcgcgtcgttgccaatcacttgggcggcgaccatCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTg                                           >  5:297777‑M2/39‑144 (MQ=255)                                                                                                                atggtcgcgtcgttgccaatcacttgggcggcgaccatCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTg                                           <  6:297777‑M2/106‑1 (MQ=255)                                                                                                                TGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGcc                                     >  1:305552‑M1/1‑149 (MQ=255)                                                                                                                TGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTACCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGcc                                     >  4:124154‑M1/1‑149 (MQ=255)                                                                                                                   TCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCa                                                   <  3:108859‑M1/132‑1 (MQ=255)                                                                                                                   TCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCa                                                   >  4:108859‑M1/1‑132 (MQ=255)                                                                                                                      CCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACaaa                               >  6:299009‑M1/1‑149 (MQ=255)                                                                                                                              gTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGc                       >  5:358998/1‑149 (MQ=255)                                                                                                                                  ttGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAAc                                                                                     <  4:261682/83‑1 (MQ=255)                                                                                                                                  ttGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAAc                                                                                     >  3:261682/1‑83 (MQ=255)                                                                                                                                         cg‑acgCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAgg            >  6:311110/1‑149 (MQ=255)                                                                                                                                              gcgaccatCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAGGTCaa        >  8:171334‑M2/9‑149 (MQ=255)                                                                                                                                                   catCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAg                              >  4:148147‑M2/4‑122 (MQ=255)                                                                                                                                                   catCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAg                              <  3:148147‑M2/119‑1 (MQ=255)                                                                                                                                                   catCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAGGTCAACGAAg   <  8:285016‑M2/146‑1 (MQ=255)                                                                                                                                                    atCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAGGTCAACGAAGa  >  4:276672‑M2/3‑149 (MQ=255)                                                                                                                                                    atCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAGGTCAACGAAGa  >  3:216661‑M2/3‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    TGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCCGCCCAAGTGATTGGCAACG‑ACGCGACCATCGCCGTCGCAGGTCAAGCCGGTAACTTCGA‑GCTGAACGTGATGCTGCCGGTGATCGCCCGCAACCTGCTGGAAAGCATCGAGCTGATGGCCAATGTCAGCCGCTTGCTGGCCGACAAAGCCATCGCCAGCTTCAAGGTCAACGAAGA  >  NC_002947/1090017‑1090311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.