New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1846324	62 (1.170)	4 (0.080)	4/244	NT	5.9%	coding (615/1377 nt)	pfeS‑II	histidine kinase
	?	NC_002947	= 1846357	67 (1.320)					coding (648/1377 nt)	pfeS‑II	histidine kinase

ACCTTGCTGTTGTGTGTAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGAAACCGACCTGCAGC  >  NC_002947/1846211‑1846499                                                                                                                                                    |                                                                                                                                               aCCTTGCTGTTGTGTGTAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGgc                                                                                                                                              <  5:335054‑M2/149‑3 (MQ=255)      gCTGTTGTGTGTAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGgcgcg                                                                                                                                           >  6:245581‑M2/1‑142 (MQ=255)       cTGTTGTGTGTAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGc                                                                                                                                        <  4:27630/149‑1 (MQ=255)            gtgtgtAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCttt                                                                                                                                    <  4:317113/148‑1 (MQ=255)             tgtgtAGGCCTGTACCGCATGCTGATAGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGa                                                                                                                                  >  1:5224/1‑149 (MQ=255)               tgtAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGAc                                                                                                                                 >  2:247480/1‑148 (MQ=255)                       tGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGcc                                                                                                                        >  5:362736/1‑149 (MQ=255)                         tACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGAc                                                                                                                                 >  1:35110/1‑138 (MQ=255)                         tACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGAc                                                                                                                                 <  2:35110/138‑1 (MQ=255)                            cGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCg                                                                                                                   >  4:170471/1‑149 (MQ=255)                                 gCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCttt                                                                                                                                    <  2:50603/127‑1 (MQ=255)                                 gCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCttt                                                                                                                                    >  1:50603/1‑127 (MQ=255)                                     aTCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAgg                                                                                                          >  8:131285/1‑149 (MQ=255)                                     aTCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAgg                                                                                                          <  3:170471/149‑1 (MQ=255)                                          gCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACgg                                                                                                     >  2:129256/1‑149 (MQ=255)                                                 aaCCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGt                                                                                                                                          >  4:286033/1‑105 (MQ=255)                                                  aCCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATg                                                                                             <  2:5224/149‑1 (MQ=255)                                                   ccAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAg                                                                                                           >  6:340223/1‑134 (MQ=255)                                                   ccAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAg                                                                                                           <  5:340223/134‑1 (MQ=255)                                                    cAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTgg                                                                                                  <  2:240338/142‑1 (MQ=255)                                                    cAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTgg                                                                                                  >  1:240338/1‑142 (MQ=255)                                                     aaCTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATgcag                                                                                          <  1:247480/149‑1 (MQ=255)                                                      aCTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTg                                                                                                   <  1:314104/139‑1 (MQ=255)                                                      aCTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTg                                                                                                   >  2:314104/1‑139 (MQ=255)                                                      aCTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGAGGCTGCAAGGCACGGTGGCTATgcag                                                                                          >  5:175354/1‑148 (MQ=255)                                                            cgAGGAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGt                                                                                   <  3:8720/149‑1 (MQ=255)                                                             gAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGtt                                                                                  >  2:265744/1‑149 (MQ=255)                                                                cacgCCCATGCCTGGCGGGCCGATCAGCTG‑GCGGCCCGCCTGGACTCGCGCACCATCGCCCCGCATGACGAATTCGCCGAACTCGCCCGTGCCATTCACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTtgct                                                                               <  4:251330/146‑1 (MQ=255)                                                                 aGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTtgctg                                                                              >  1:56502/1‑149 (MQ=255)                                                                   gCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCTCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCaa                                                                                                            <  8:143825/117‑1 (MQ=255)                                                                   gCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCACGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCaa                                                                                                            >  7:143825/1‑117 (MQ=255)                                                                      aaTGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGa                                                                         <  6:362736/149‑1 (MQ=255)                                                                           cTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGt                                                                                   >  2:210858/1‑134 (MQ=255)                                                                           cTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGt                                                                                   >  5:251868/1‑134 (MQ=255)                                                                           cTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGt                                                                                   <  1:210858/134‑1 (MQ=255)                                                                           cTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGt                                                                                   <  6:251868/134‑1 (MQ=255)                                                                           cTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGt                                                                    <  3:63601/149‑1 (MQ=255)                                                                            aggCGGGCCGA‑CAGCTGATCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCATGGCACGGTg                                                                                                   >  5:305789/2‑117 (MQ=255)                                                                            aggCGGGCCGA‑CAGCTGATCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTg                                                                                                   <  6:305789/116‑1 (MQ=255)                                                                            aggCGGGCCGA‑CAGCTGATCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTc                                                                   >  3:84028/2‑149 (MQ=255)                                                                            aggCGGGCCGA‑CAGCTGATCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTc                                                                   <  4:84028/148‑1 (MQ=255)                                                                              gCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACgg                                                                                                     >  1:270013/1‑113 (MQ=255)                                                                              gCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACgg                                                                                                     <  2:270013/113‑1 (MQ=255)                                                                              gCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTc                                                                   <  6:335054/147‑1 (MQ=255)                                                                                 ggCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTg                                                                                                               >  7:110405/1‑100 (MQ=255)                                                                                 ggCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTg                                                                                                               <  8:110405/100‑1 (MQ=255)                                                                                    cGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGAGACCTGTCCCACGaaa                                                           >  7:308296/1‑149 (MQ=255)                                                                                     gATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAAt                                                          <  2:56502/149‑1 (MQ=255)                                                                                                       ccTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGcc                                         >  5:210101/1‑149 (MQ=255)                                                                                                        cTGGACTCGCGCGCCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGaa                                                                        >  2:214302/1‑116 (MQ=255)                                                                                                        cTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGgcgcgagtccaggcgggccgacagctgatcggcccgccaggcattggcctgctcgcgaagttggttcagcggcacgatcagcatgcggtacaggc                                                 >  8:294792‑M2/1‑45 (MQ=255)                                                                                                        cTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGgcgcgagtccaggcgggccgacagctgatcggcccgccaggcattggcctgctcgcgaagttgggtcagcggcacgatcagcatgcggtacaggc                                                 <  7:294792‑M2/140‑96 (MQ=255)                                                                                                            aCTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGTGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTg                                    <  6:175354/149‑1 (MQ=255)                                                                                                              tCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGgcgcgagtccaggcgggccgacaccagatcggccccccaggcaatggccagctcgcgaagttggttcagcggcacgatacaccggcggtacaagccaacacaccacagc                                   <  6:51656‑M2/148‑110 (MQ=255)                                                                                                                gcgcACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTtgctgc                                                                             >  8:15012/1‑104 (MQ=255)                                                                                                                gcgcACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTtgctgc                                                                             <  7:15012/104‑1 (MQ=255)                                                                                                                gcgcACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCa                                                                >  2:301415/1‑117 (MQ=255)                                                                                                                gcgcACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCa                                                                <  1:301415/117‑1 (MQ=255)                                                                                                                      cATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTgg                                                                                                  <  2:306080/77‑1 (MQ=255)                                                                                                                      cATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTgg                                                                                                  >  1:306080/1‑77 (MQ=255)                                                                                                                      cATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCt                          >  1:341349/1‑149 (MQ=255)                                                                                                                          gCCCGGCATGACGAATTGGGCGAACTGGCGCGTACCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCa                                                     <  6:175440/118‑1 (MQ=255)                                                                                                                          gCCCGGCATGACGAATTGGGCGAACTGGCGCGTACCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCa                                                     >  5:175440/1‑118 (MQ=255)                                                                                                                            ccGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATg                    >  1:148886/1‑149 (MQ=255)                                                                                                                                        aTTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGAAACCGAcc        >  3:251209/1‑149 (MQ=255)                                                                                                                                         ttGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGAAACCGACCt       <  4:251209/149‑1 (MQ=255)                                                                                                                                            ggCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGc                            <  4:295289/125‑1 (MQ=255)                                                                                                                                            ggCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGc                            >  3:295289/1‑125 (MQ=255)                                                                                                                                            ggCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGAAACCGACCTg      >  8:287524/1‑147 (MQ=255)                                                                                                                                             gCGAACTGgcgcgagtccaggcgggccgacagctgatcggcccgccaggcattggcctgctcgcgaagttggttcagcggcacgatcagcatgcggtacaggcctacacacaacagcaaggtgaacagccccgggatgatgccgttggt   >  5:51656‑M2/1‑8 (MQ=255)                                                                                                                                              cGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGTGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGAAACCGACCTGCAGc  <  1:265744/149‑1 (MQ=255)                                                                                                                                              cGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGt                  <  1:192074/133‑1 (MQ=255)                                                                                                                                              cGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGt                  >  2:192074/1‑133 (MQ=255)                                                                                                                                               gAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGaaa              <  7:75674/136‑1 (MQ=255)                                                                                                                                               gAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGaaa              >  8:75674/1‑136 (MQ=255)                                                                                                                                                    |                                                                                                                                               ACCTTGCTGTTGTGTGTAGGCCTGTACCGCATGCTGATCGTGCCGCTGAACCAACTTCGCGAGCAGGCCAATGCCTGGCGGGCCGATCAGCTG‑TCGGCCCGCCTGGACTCGCGCACCATCGCCCGGCATGACGAATTGGGCGAACTGGCGCGTGCCTTTGACCAGATGGCCGAGCGGCTGCAAGGCACGGTGGCTATGCAGCAGCAGTTGCTGCGCGACCTGTCCCACGAAATGCGCACGCCGCTGAGCCGGCTGCGGGTGGCCTGCGATGGTGAAACCGACCTGCAGC  >  NC_002947/1846211‑1846499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.