New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2098415 =	53 (1.000)	3 (0.060)	3/226	NT	5.5%	coding (1475/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2098464 =	55 (1.170)					coding (1426/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

GCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTTG  >  NC_002947/2098317‑2098612                                                                                                                                                    |                                                                                                                                                     gCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGt                                                                                                                                                      >  5:39625/1‑148 (MQ=255) gCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTg                                                                                                                                                     <  7:102249/149‑1 (MQ=255)  cGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTg                                                                                                                                                     >  2:162822/1‑148 (MQ=255)   ggCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCATGCACAGCTTACGCGTCAAAGCCAGGACCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTg                                                                                                                                                     >  7:60935/1‑147 (MQ=255)      aaTGCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAggg                                                                                                                                                <  6:364672/149‑1 (MQ=255)        ttCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGGAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCTTAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCt                                                                                                                                              <  8:229662/149‑1 (MQ=255)        ttCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCt                                                                                                                                              <  8:310921/149‑1 (MQ=255)        ttCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCt                                                                                                                                              >  8:282587/1‑149 (MQ=255)              ggTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTgg                                                                                                                                            >  8:327659/1‑145 (MQ=255)                      aGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATgc                                                                                                                                     >  5:343784/1‑144 (MQ=255)                      aGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATgc                                                                                                                                     <  6:343784/144‑1 (MQ=255)                        cTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTg                                                                                                                              <  1:162822/149‑1 (MQ=255)                           ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTg                                                                                                                                             <  8:57218/131‑1 (MQ=255)                           ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTg                                                                                                                                             >  7:57218/1‑131 (MQ=255)                           ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATg                                                                                                                                      <  6:47507/138‑1 (MQ=255)                           ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATg                                                                                                                                      >  5:47507/1‑138 (MQ=255)                           ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGAGAAGGGCTGGAAGATGCGCGCCTGGGc                                                                                                                           <  2:41214/149‑1 (MQ=255)                             aaaGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGt                                                                                                                         >  8:273467/1‑149 (MQ=255)                                 cccGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAAGGCTGGAAGATGCGCGCCTGGGCGTCTTc                                                                                                                     >  5:316064/1‑149 (MQ=255)                                    ggCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCggg                                                                                                                  <  4:29666/149‑1 (MQ=255)                                       tgggAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGGTCAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCTGGGTACTGGCGGGTGATGCCTGCTCCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgat                                                                                                               <  8:60935/147‑1 (MQ=255)                                       tCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGc                                                                                                                           <  4:190197/137‑1 (MQ=255)                                       tCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGc                                                                                                                           >  3:190197/1‑137 (MQ=255)                                         ggAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACTGGTTAGGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCGTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgc                                                                                                             <  5:199928/149‑1 (MQ=255)                                          gAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgcc                                                                                                            >  1:290717/1‑149 (MQ=255)                                           aGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgccg                                                                                                           <  4:126249/149‑1 (MQ=255)                                              gAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgccgatg                                                                                                        >  4:270921/1‑149 (MQ=255)                                                      aGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATc                                                                                                >  3:72460/1‑149 (MQ=255)                                                        gTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCggg                                                                                                                  >  3:129143/1‑129 (MQ=255)                                                         tGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCg                                                                                             <  4:72460/149‑1 (MQ=255)                                                         tGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCg                                                                                             <  6:39625/149‑1 (MQ=255)                                                                       cTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCggg                                                                                                                  <  8:81437/114‑1 (MQ=255)                                                                          gCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCacac                                                                            >  7:183555/1‑149 (MQ=255)                                                                           cacaGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCacac                                                                            >  8:170603/1‑148 (MQ=255)                                                                                gTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGc                                                                                                                           <  4:189549/96‑1 (MQ=255)                                                                                gTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGc                                                                                                                           >  3:189549/1‑96 (MQ=255)                                                                                     gcgTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATg                                                                 <  7:170603/149‑1 (MQ=255)                                                                                           aaGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgccgc                                                            >  2:38908/1‑148 (MQ=255)                                                                                              ccaggcccaggcCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAg                                                        >  3:35428/1‑149 (MQ=255)                                                                                               caggcccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAgc                                                       >  8:92492/1‑149 (MQ=255)                                                                                                aggcccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAgcg                                                      >  1:60646/1‑149 (MQ=255)                                                                                                 ggcccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGGAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAgcgc                                                     <  7:282587/149‑1 (MQ=255)                                                                                                 ggcccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAgcgc                                                     <  8:183555/149‑1 (MQ=255)                                                                                                  gcccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCCCCGACAAAGACCGCCAAGCGCa                                                    >  6:273428/1‑149 (MQ=255)                                                                                                    ccaggccggtgccggcatcacccgccagtacggtggcaccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACg                                                  >  4:243558‑M2/49‑149 (MQ=255)                                                                                                        GCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGa                                              >  4:35428‑M1/1‑149 (MQ=255)                                                                                                          cggtgccggcatcacccgccagtacggtggcaccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATc                                                                                                <  3:290395‑M2/55‑1 (MQ=255)                                                                                                          cggtgccggcatcacccgccagtacggtggcaccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCAGGTATc                                                                                                >  4:290395‑M2/43‑97 (MQ=255)                                                                                                          CGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgccg                                                             <  2:60736‑M1/132‑1 (MQ=255)                                                                                                          CGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgccg                                                             >  1:60736‑M1/1‑132 (MQ=255)                                                                                                                CACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCg                                      >  7:327659‑M1/1‑149 (MQ=255)                                                                                                                CACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGAGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGa                                                                      <  2:312131‑M1/117‑1 (MQ=255)                                                                                                                CACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGAGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGa                                                                      >  1:312131‑M1/1‑117 (MQ=255)                                                                                                                 aCCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCg                                      >  3:329128/1‑148 (MQ=255)                                                                                                                   cGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCgg                                         >  6:68770/1‑143 (MQ=255)                                                                                                                   cGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCgg                                         <  5:68770/143‑1 (MQ=255)                                                                                                                     tACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACg                                                                                 <  3:323337/101‑1 (MQ=255)                                                                                                                     tACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACg                                                                                 >  4:323337/1‑101 (MQ=255)                                                                                                                     tACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCg                                 >  1:317304/1‑149 (MQ=255)                                                                                                                     tACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCg                                 >  4:224555/1‑149 (MQ=255)                                                                                                                      aCTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCgg                                >  2:303254/1‑149 (MQ=255)                                                                                                                       cTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCgg                                <  1:303254/148‑1 (MQ=255)                                                                                                                       cTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCgg                                <  3:224555/148‑1 (MQ=255)                                                                                                                          gCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCgg                                         <  7:46956/136‑1 (MQ=255)                                                                                                                          gCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCgg                                         >  8:46956/1‑136 (MQ=255)                                                                                                                          gCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGt                              <  7:273467/147‑1 (MQ=255)                                                                                                                          gCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGt                              <  2:290717/147‑1 (MQ=255)                                                                                                                          gCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGt                              <  3:270921/147‑1 (MQ=255)                                                                                                                                  tGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAgc                    <  1:38908/149‑1 (MQ=255)                                                                                                                                     cGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGcgcg                 >  2:89508/1‑149 (MQ=255)                                                                                                                                       gcaccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGtt               <  5:273428‑M2/136‑1 (MQ=255)                                                                                                                                          ccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGa            <  7:92492‑M2/139‑1 (MQ=255)                                                                                                                                              cctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGAcagc        <  4:329128‑M2/143‑1 (MQ=255)                                                                                                                                                  ggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGt    <  2:60646‑M2/147‑1 (MQ=255)                                                                                                                                                    tGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTTg  >  4:172236/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTTG  >  NC_002947/2098317‑2098612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.