New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 325943963 (1.190)4 (0.080) 4/246 NT 6.2% coding (753/1452 nt) PP_2856 hypothetical protein
?NC_002947 = 3259473 60 (1.170)coding (719/1452 nt) PP_2856 hypothetical protein

ACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTGGCCGAAGCCGTGGCAGTGGCGT  >  NC_002947/3259325‑3259620
                                                                                                                                                    |                                                                                                                                                   
aCCCCAGCCGAACGAGCCACTTGCGCACGAGTTGTGGGAGCCGCTGGCATTGCAGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGAAGCTGAAGCTCGAAGACGAGCTGCcgtcgt                                                                                                                                                     >  6:112634/1‑149 (MQ=255)
 ccccAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTc                                                                                                                                                    <  7:113838‑M2/149‑2 (MQ=255)
  cccAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTcg                                                                                                                                                   <  1:153682‑M2/149‑3 (MQ=255)
  cccAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTcg                                                                                                                                                   <  1:69160‑M2/149‑3 (MQ=255)
   ccAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTcgg                                                                                                                                                  >  2:153682‑M2/1‑146 (MQ=255)
        cGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAg                                                                                                                                             >  8:206575/1‑149 (MQ=255)
        cGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAg                                                                                                                                             <  3:185686/149‑1 (MQ=255)
          aaCGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGgtcgt                                                                                                                                                     <  8:318454/139‑1 (MQ=255)
          aaCGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGgtcgt                                                                                                                                                     >  7:318454/1‑139 (MQ=255)
          aaCGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGtt                                                                                                                                           <  1:187965/149‑1 (MQ=255)
               gCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAg                                                                                                                                       <  2:69160/148‑1 (MQ=255)
                  aCTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGc                                                                                                                                   >  8:262275/1‑149 (MQ=255)
                  aCTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGc                                                                                                                                   <  7:262275/149‑1 (MQ=255)
                  aCTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGc                                                                                                                                   >  4:25378/1‑149 (MQ=255)
                      gcgcTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGcct                                                                                                                                 <  7:281420/147‑1 (MQ=255)
                          tCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCcttccttc                                                                                                                           >  4:215021/1‑149 (MQ=255)
                               ttGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGc                                                                                                                       <  6:189517/148‑1 (MQ=255)
                                 gtgGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCtt                                                                                                                     <  8:34226/148‑1 (MQ=255)
                                                 ttGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACtt                                                                                                    >  4:243919/1‑149 (MQ=255)
                                                   gCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTg                                                                                                   <  7:206575/148‑1 (MQ=255)
                                                   gCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTg                                                                                                   <  8:113838/148‑1 (MQ=255)
                                                    cTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTgg                                                                                                  <  3:243919/148‑1 (MQ=255)
                                                    cTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTgg                                                                                                  <  3:86562/148‑1 (MQ=255)
                                                     tGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTAGGt                                                                                                 >  7:209317/1‑148 (MQ=255)
                                                      ggATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGa                                                                                               >  5:64465/1‑149 (MQ=255)
                                                       gATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGa                                                                                               <  6:64465/148‑1 (MQ=255)
                                                        aTTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATg                                                                                             <  7:267994/149‑1 (MQ=255)
                                                            cGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTaa                                                                                         <  3:25378/149‑1 (MQ=255)
                                                            cGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCAGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTaa                                                                                         >  6:11435/1‑149 (MQ=255)
                                                              aGCCGCTGGCTTTCCAGCCACTGGAGCCGCTGGAACTGGCGGTTTGCGGTCCGGCGACTCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATc                                                                                       <  5:112634/149‑1 (MQ=255)
                                                              aGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTAGGTGATGGTAATc                                                                                       <  8:209317/149‑1 (MQ=255)
                                                                  gCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTAt                                                                                   >  6:125435/1‑149 (MQ=255)
                                                                   cTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCt                                                                                                             <  8:257663/122‑1 (MQ=255)
                                                                            cAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGa                                                                           >  5:17196/1‑147 (MQ=255)
                                                                              gCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTAt                                                                                   <  7:307356/137‑1 (MQ=255)
                                                                              gCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTAt                                                                                   >  8:307356/1‑137 (MQ=255)
                                                                               ccACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGt                                                                      >  4:333349/1‑149 (MQ=255)
                                                                                 aCTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGc                                                                    >  2:279396/1‑149 (MQ=255)
                                                                                     gAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGt                                                                 <  3:215021/148‑1 (MQ=255)
                                                                                                  tGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTgttgtt                                                    >  6:326522/1‑148 (MQ=255)
                                                                                                   ggCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTa                                                  >  2:49124/1‑149 (MQ=255)
                                                                                                   ggCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTa                                                  >  8:196163/1‑149 (MQ=255)
                                                                                                          tGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATc                                             <  1:279396/147‑1 (MQ=255)
                                                                                                          tGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATc                                             <  8:164702/147‑1 (MQ=255)
                                                                                                            cgcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGc                                         >  8:302462/1‑149 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTcggtgcgcaaagcgccagttccagcggctccagtggctggaacgccagcggctcgcaatccagcaatgccagcggctcccacaactcgagcgcaagtggctcgttcggc                                        <  3:162024‑M2/149‑110 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGt                                                                 <  6:350816/124‑1 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGt                                                                 >  5:350816/1‑124 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACtgttgt                                                     >  1:2210/1‑136 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACtgttgt                                                     <  2:2210/136‑1 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAg                                           >  6:306063/1‑146 (MQ=255)
                                                                                                             gcACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCCTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAg                                           <  5:306063/146‑1 (MQ=255)
                                                                                                               aCCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTcggtgcgcaaagcgccagttccagcggctccagtggctggaacgccagcggctcgcaatccagcaatgccagcggctcccacaactcgagcgcaagtggctcgttcggctg                                      <  4:286578‑M2/149‑112 (MQ=255)
                                                                                                                ccGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTgg                                     <  5:326522/149‑1 (MQ=255)
                                                                                                                 cGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTcggtgcgcaaagcgccagttccagcggctccagtggctggaacgccagcggctcgcaatccagcaatgccagcggctcccacaactcgagcgcaagtggctcgttcggctggg                                    >  4:162024‑M2/1‑36 (MQ=255)
                                                                                                                 cGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTggg                                    <  5:11435/149‑1 (MQ=255)
                                                                                                                    cGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAgg                                          >  2:195112/1‑140 (MQ=255)
                                                                                                                    cGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAgg                                          <  1:195112/140‑1 (MQ=255)
                                                                                                                      actcTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTc                               <  8:301268/146‑1 (MQ=255)
                                                                                                                          tGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTa                                                  >  4:228622/1‑126 (MQ=255)
                                                                                                                          tGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTa                                                  <  3:228622/126‑1 (MQ=255)
                                                                                                                          tGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATc                                             >  4:38457/1‑131 (MQ=255)
                                                                                                                            aaGCTCGAAGACGAGCTGCGGTCGTcggtgcgcaaagcgccagttccagcggctccagtggctggaacgccagcggctcgcaatccagcaatgccagcggctcccacaactcgagcgcaagtggctcgttcggctggggtgccagtgg                          >  3:286578‑M2/1‑25 (MQ=255)
                                                                                                                             aGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTg                        <  5:125435/149‑1 (MQ=255)
                                                                                                                               cTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTGGc                      >  8:26749/1‑149 (MQ=255)
                                                                                                                                tCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGATGTTTACAATCAg                                           >  5:207413/1‑127 (MQ=255)
                                                                                                                                tCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGATGTTTACAATCAg                                           <  6:207413/127‑1 (MQ=255)
                                                                                                                                 cGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACtt                                                                                                    >  4:252460/1‑69 (MQ=255)
                                                                                                                                 cGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACtt                                                                                                    <  3:252460/69‑1 (MQ=255)
                                                                                                                                        gAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTggg                                    >  1:61474/1‑126 (MQ=255)
                                                                                                                                        gAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTggg                                    <  2:61474/126‑1 (MQ=255)
                                                                                                                                        gAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTGGCCGAAGCCGt             <  1:49124/149‑1 (MQ=255)
                                                                                                                                         aGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTGGCCGAAGCCGTg            <  7:196163/149‑1 (MQ=255)
                                                                                                                                                   gtcggtcgAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTGGCCGAAGCCGTGGCAGTGGCGt  >  5:124108/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGGCGACGCTGAAGCTCGAAGACGAGCTGCGGTCGTCGGTCGAGTTGAAGCTGCCTTCCTTCGAGCTTGAACCGCTGGCCGACTTGGTGATGGTAATCGTATCCACCCGATAGGTGCGGTCGGCACTGTTGTTTACAATCAGGCCTGGGCCGTCCTGATTGGCCGAAGCCGTGGCAGTGGCGT  >  NC_002947/3259325‑3259620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.