New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4950757 =	57 (1.080)	6 (0.120)	4/248	NT	10.2%	coding (94/498 nt)	fliL	flagellar protein FliL
	?	NC_002947	4950789 =	50 (0.970)					coding (62/498 nt)	fliL	flagellar protein FliL

GAAGGCCGGGGTCAGCGCCTCGTATATCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGATTTTGCAGGGGATGGATT  >  NC_002947/4950641‑4950936                                                                                                                                                     |                                                                                                                                                     gAAGGCCGGGGTCAGCGCCTCGTATATCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGAcagcca                                                                                                                                                      <  2:117684/149‑1 (MQ=255)    tcaagccaagccattctcctttgaacccccgatggacgacggattattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctGGCCGATCGCCAGCAACAGGCCGACGACAGCcagca                                                                                                                                                   >  7:125461‑M1/114‑149 (MQ=255)    ggCCGGGGGCAGCGCCTCGTATATCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCcagca                                                                                                                                                   <  1:135915/149‑1 (MQ=255)      aagccaagccattctcctttgaacccccgatggacgacggattattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctGGCCGATCGCCAGCAACAGGCCGACGACAGCcagca                                                                                                                                                   >  7:120665‑M1/112‑147 (MQ=255)            tCAGCGCCTCGTATATCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGc                                                                                                                                           <  4:319805/149‑1 (MQ=255)              aGCGCCTCGTATATCGCCCCTGGCATGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCtt                                                                                                                                         >  6:81330/1‑149 (MQ=255)                      gTATATCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGACGACGCAAGCCAGCAGGAGCAGCTTGA‑GTTTga                                                                                                                                >  3:70498/1‑148 (MQ=255)                      cctttgacccccgatggacgacggattattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctGGCCGATCGCCAGCAACAGGCCGACGAcagccagc                                                                                                                                                    >  4:269158‑M1/96‑130 (MQ=255)                      cctttgacccccgatggacgacggattattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctGGCCGATCGCCAGCAACAGGCCGACGAcagccagc                                                                                                                                                    <  3:269158‑M1/35‑1 (MQ=255)                       tataTCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGca                                                                                                                               <  5:250205/149‑2 (MQ=255)                         tatCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCt                                                                                                                              <  2:262707/148‑1 (MQ=255)                               cccTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGACCCAGGTAGCGCCCACCGAAAGGCCGATCGCCCGCCACAGGCCGCCGCCAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTgg                                                                                                                       >  5:153651/1‑149 (MQ=255)                                      tagACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGAAACAGCCCGACGACCCCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTTGCGGGGTc                                                                                                                >  1:320778/3‑149 (MQ=255)                                                   ccGTGGCCTCAGCTGCCGGAGCCGGCTCGCGATTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCg                                                                                                   <  4:70498/149‑1 (MQ=255)                                                         ccTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTc                                                                                             <  8:247303/149‑1 (MQ=255)                                                          cTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCg                                                                                            >  6:133728/1‑149 (MQ=255)                                                                 gCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGa                                                                                                           <  8:317270/127‑1 (MQ=255)                                                                 gCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGa                                                                                                           >  7:317270/1‑127 (MQ=255)                                                                        ccGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATc                                                                              >  4:132765/1‑149 (MQ=255)                                                                               gctcTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCcgtcg                                                                         <  1:299330/147‑1 (MQ=255)                                                                                 tctTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTcc                                                                      >  4:306346/1‑148 (MQ=255)                                                                                     gtgCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCgg                                                                 >  4:247118/1‑149 (MQ=255)                                                                                        cATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGc                                                                                      <  3:37784/125‑1 (MQ=255)                                                                                        cATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGc                                                                                      >  4:37784/1‑125 (MQ=255)                                                                                        cATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCaat                                                                                  <  3:72457/129‑1 (MQ=255)                                                                                        cATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCaat                                                                                  >  4:72457/1‑129 (MQ=255)                                                                                        cATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCgggg                                                               <  3:132765/148‑1 (MQ=255)                                                                                           gatgaACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCATCCATCgg                                                                 <  6:45656/143‑1 (MQ=255)                                                                                           gatgaACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCATCCATCgg                                                                 >  5:45656/1‑143 (MQ=255)                                                                                                  cAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAg                                                       >  1:74550/1‑146 (MQ=255)                                                                                                   aGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCcgtc                                                                          >  6:31847/1‑126 (MQ=255)                                                                                                   aGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCcgtc                                                                          <  5:31847/126‑1 (MQ=255)                                                                                                    ggTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGCCAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGaa                                                  >  7:261103/1‑149 (MQ=255)                                                                                                    ggTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGaa                                                  <  2:74550/149‑1 (MQ=255)                                                                                                     gTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGGCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAt                                                 <  5:81330/149‑1 (MQ=255)                                                                                                     gTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAt                                                 >  3:158050/1‑149 (MQ=255)                                                                                                      tAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAtg                                                >  7:181279/1‑149 (MQ=255)                                                                                                          gcCCACCGAAAGGCCGATCGCCAGCAACAGGACGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAtggctt                                            >  7:16885/1‑149 (MQ=255)                                                                                                             cACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAtggctt                                            <  8:280665/146‑1 (MQ=255)                                                                                                             cACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAtggctt                                            >  7:280665/1‑146 (MQ=255)                                                                                                             cACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGAACAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAAtggcttggc                                         >  1:257003/1‑149 (MQ=255)                                                                                                              aCCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGt                                                             >  5:11598/1‑128 (MQ=255)                                                                                                              aCCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGt                                                             <  6:11598/128‑1 (MQ=255)                                                                                                               ccGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATggcttggctt                                       <  5:123412/149‑1 (MQ=255)                                                                                                               ccGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATggcttggctt                                       >  5:253610/1‑149 (MQ=255)                                                                                                                 tgctggctgtcgtcggcctgttgctggcgatcggccAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATggcttggctt                                       >  7:120665‑M2/37‑147 (MQ=255)                                                                                                                 tgctggctgtcgtcggcctgttgctggcgatcggccAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGa                                     >  7:125461‑M2/37‑149 (MQ=255)                                                                                                                 gAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGa                                     <  3:306346/149‑1 (MQ=255)                                                                                                                  gctggctgtcgtcggcctgttgctggcgatcggccAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGG‑TCAAAgg                                                      <  3:269158‑M2/95‑1 (MQ=255)                                                                                                                  gctggctgtcgtcggcctgttgctggcgatcggccAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGG‑TCAAAgg                                                      >  4:269158‑M2/36‑130 (MQ=255)                                                                                                                   aaGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGc                                   <  3:247118/149‑1 (MQ=255)                                                                                                                         gATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCTCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAgtgt                             <  1:177829/149‑1 (MQ=255)                                                                                                                           tCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGAGGTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAgtgt                             >  1:68494/1‑148 (MQ=255)                                                                                                                            gtcggcctgttgctggcgatcggccAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTa                           <  8:120665‑M2/123‑1 (MQ=255)                                                                                                                            gtcggcctgttgctggcgatcggccAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTa                           <  8:125461‑M2/123‑1 (MQ=255)                                                                                                                              ccAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAg                                    >  2:132283/1‑137 (MQ=255)                                                                                                                              ccAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAg                                    <  1:132283/137‑1 (MQ=255)                                                                                                                                   aaCAGGCCGACGACAGGCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGAt                   <  8:261103/149‑1 (MQ=255)                                                                                                                                      aGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTTCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCTCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGAtttt                <  2:320778/149‑1 (MQ=255)                                                                                                                                          cgacgaCAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGATTTTGCAg            <  8:181279/149‑1 (MQ=255)                                                                                                                                           gacgacAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGATTTTGCAgg           >  2:93925/1‑149 (MQ=255)                                                                                                                                           gacgacAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGATTTTGCAgg           <  8:16885/149‑1 (MQ=255)                                                                                                                                                    cAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGATTTTGCAGGGGATGGAtt  <  4:158050‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GAAGGCCGGGGTCAGCGCCTCGTATATCGCCCCTGGCTTGACGTTGCTGGCCGTGGCCTCAGCGGCCGGAGCCGGCTCGCTCTTGTGCATGATGAACCAGGTAGCGCCCACCGAAAGGCCGATCGCCAGCAACAGGCCGACGACAGCCAGCAGGATCAGCTTGA‑GTTTGCCTTTAGTGGCGGGGTCTTTGACTGCTTCGCTCTTCGCCATGCCAATAATCCGTCGTCCATCGGGGGTTCAAAGGAGAATGGCTTGGCTTGAGCAAGTGTTATGCCAGATTTTGCAGGGGATGGATT  >  NC_002947/4950641‑4950936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.