New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 511075465 (1.230)4 (0.080) 4/244 NT 5.7% intergenic (‑49/+590) aroP‑II/rluB aromatic amino acid transport protein/23S rRNA pseudouridylate synthase B
?NC_002947 = 5110781 69 (1.360)intergenic (‑76/+563) aroP‑II/rluB aromatic amino acid transport protein/23S rRNA pseudouridylate synthase B

GGCGATCAACTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCGTCAACGCGTTGCATC  >  NC_002947/5110634‑5110929
                                                                                                                                                   |                                                                                                                                                     
ggCGATCAACTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAg                                                                                                                                                      >  4:275206‑M2/1‑148 (MQ=255)
 gCGATCAACTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAgg                                                                                                                                                     >  3:241965‑M2/1‑147 (MQ=255)
   gATCAACTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAggtg                                                                                                                                                   <  8:309730‑M2/149‑5 (MQ=255)
       aaCTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGtt                                                                                                                                                <  3:162940/148‑1 (MQ=255)
         cTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTAcc                                                                                                                                             <  5:364659/149‑1 (MQ=255)
           ggATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTg                                                                                                                                          >  5:325247/1‑149 (MQ=255)
                  gCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTc                                                                                                                                    <  7:309730/149‑1 (MQ=255)
                        cttcAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGAc                                                                                                                              <  8:63636/148‑1 (MQ=255)
                            aGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACCCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAg                                                                                                                         >  4:297626/1‑149 (MQ=255)
                              gCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGt                                                                                                                       >  2:318329/1‑149 (MQ=255)
                                cccGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTggg                                                                                                                                        >  4:154892/1‑131 (MQ=255)
                                cccGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTggg                                                                                                                                        <  3:154892/131‑1 (MQ=255)
                                cccGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTgc                                                                                                                     >  5:89992/1‑149 (MQ=255)
                                 ccGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGtt                                                                                                                                                >  1:162091/1‑122 (MQ=255)
                                 ccGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGtt                                                                                                                                                <  2:162091/122‑1 (MQ=255)
                                         gCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGc                                                                                                            <  1:318329/149‑1 (MQ=255)
                                          cTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCg                                                                                                           >  2:335255/1‑149 (MQ=255)
                                          cTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCgg                                                                                                          <  6:325247/149‑1 (MQ=255)
                                            cGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCggg                                                                                                         <  6:81215/149‑1 (MQ=255)
                                             gCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGt                                                                                                        >  2:328947/1‑149 (MQ=255)
                                             gCCTGAATGCATGTTTTGTCCACCCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCggg                                                                                                         <  3:297626/148‑1 (MQ=255)
                                                          ttttGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCg                                                                                                           >  2:235749/1‑133 (MQ=255)
                                                          ttttGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCg                                                                                                           <  1:235749/133‑1 (MQ=255)
                                                          ttttGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGa                                                                                           <  1:327046/149‑1 (MQ=255)
                                                               tCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCaa                                                                                       <  1:328947/148‑1 (MQ=255)
                                                                ccACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCgg                                                                                                          <  8:260843/128‑1 (MQ=255)
                                                                ccACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCgg                                                                                                          >  7:260843/1‑128 (MQ=255)
                                                                 cACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAagag                                                                                    >  3:97921/1‑149 (MQ=255)
                                                                 cACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAaga                                                                                     <  6:263297/148‑1 (MQ=255)
                                                                 cACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAaga                                                                                     <  1:335255/148‑1 (MQ=255)
                                                                    tCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGTACACACCGCGCTCGTGGCGCAGCGGAATTGGAAAGGTGTATACCTTGGGTTTATTGACCTAAGGTGCCGCAGGAGCGGGTCAACCAGGATTTATCAAGAGt                                                                                   >  3:100045/1‑147 (MQ=255)
                                                                    tCATGAACGAAGTCACCTGCATTGTTTTTAACTGTGACCGAATCGGACCCACCGCGCTCGTGGAGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTCACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTCATCaa                                                                                       >  1:32769/1‑143 (MQ=255)
                                                                    tCATGAACGAAGTCAACTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCTGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTTATCaa                                                                                       <  2:32769/143‑1 (MQ=255)
                                                                       tGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATc                                                                                         <  4:97168/138‑1 (MQ=255)
                                                                       tGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATc                                                                                         >  3:97168/1‑138 (MQ=255)
                                                                        gAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGcgcg                                                                              <  6:89992/148‑1 (MQ=255)
                                                                        gAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCgg                                                                             >  2:33943/1‑149 (MQ=255)
                                                                          aCGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTa                                                                           >  3:66633/1‑149 (MQ=255)
                                                                                tCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCtt                                                                                                                                  <  8:177430/89‑1 (MQ=255)
                                                                                tCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCtt                                                                                                                                  >  7:177430/1‑89 (MQ=255)
                                                                                 cACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCaa                                                                      >  1:90498/1‑147 (MQ=255)
                                                                                  aCCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAagag                                                                   >  5:282493/1‑149 (MQ=255)
                                                                                  aCCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAagag                                                                   >  8:113273/1‑149 (MQ=255)
                                                                                   ccTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAgg                                                                  <  4:66633/149‑1 (MQ=255)
                                                                                      gCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATc                                                                                         <  4:42761/123‑1 (MQ=255)
                                                                                      gCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATc                                                                                         >  3:42761/1‑123 (MQ=255)
                                                                                       cATTGTATTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGGTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGt                                                                <  8:247981/147‑1 (MQ=255)
                                                                                            tttttATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTgcg                                                                                <  4:118616/126‑1 (MQ=255)
                                                                                            tttttATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTgcg                                                                                >  3:118616/1‑126 (MQ=255)
                                                                                            tttttATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAgg                                                                  >  7:234535/1‑140 (MQ=255)
                                                                                            tttttATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAgg                                                                  <  8:234535/140‑1 (MQ=255)
                                                                                                  tCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAAcg                                                   >  1:318958/1‑149 (MQ=255)
                                                                                                      tgACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGc                                                                                               <  5:253542/101‑1 (MQ=255)
                                                                                                      tgACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGc                                                                                               >  6:253542/1‑101 (MQ=255)
                                                                                                      tgACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAAcgcg                                                 <  1:33943/147‑1 (MQ=255)
                                                                                                        aCGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACgcggcg                                              >  5:274197/1‑148 (MQ=255)
                                                                                                             aTCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGt                                        <  2:318958/149‑1 (MQ=255)
                                                                                                              tCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGta                                       >  5:103072/1‑149 (MQ=255)
                                                                                                                ggACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGTGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAg                                                           >  6:274478/1‑127 (MQ=255)
                                                                                                                ggACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAg                                                           <  5:274478/127‑1 (MQ=255)
                                                                                                                 gACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAggtgggtccgattccgtcacagataaaaacaatgcaggtgacttcgttcatgagtggacaaaacatgcattcaggcgagctaaagcggggcctgaagaaccgccatatccagtt                                     <  6:240091‑M2/149‑115 (MQ=255)
                                                                                                                   cccACCGCGCTCGTGGCGCAGCGGAATGGGCAAggtgggtccgattccgtcacagataaaaacaatgcaggtgacttcgttcatgagtggacaaaacatgcattcaggcgagctaaagcggggcctgaagaaccgcc                                               <  8:290712‑M2/137‑105 (MQ=255)
                                                                                                                   cccACCGCGCTCGTGGCGCAGCGGAATGGGCAAggtgggtccgattccgtcacagataaaaacaatgcaggtgacttcgttcatgagtggacaaaacatgcattcaggcgagctaaagcggggcctgaagaaccgcc                                               >  7:290712‑M2/1‑33 (MQ=255)
                                                                                                                     cACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCt                                <  6:274197/149‑1 (MQ=255)
                                                                                                                      aCCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACgcggc                                               <  1:200116/133‑1 (MQ=255)
                                                                                                                      aCCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACgcggc                                               >  2:200116/1‑133 (MQ=255)
                                                                                                                      aCCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTg                               >  5:128094/1‑149 (MQ=255)
                                                                                                                      aCCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTg                               >  2:23919/1‑149 (MQ=255)
                                                                                                                         gcgcTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACg                                                                         >  7:134514/1‑104 (MQ=255)
                                                                                                                         gcgcTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACg                                                                         <  8:134514/104‑1 (MQ=255)
                                                                                                                           gcTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAggg                                                                 >  8:131266/1‑110 (MQ=255)
                                                                                                                                   cgcAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGc                  <  1:23919/149‑1 (MQ=255)
                                                                                                                                   cgcAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGc                  <  4:97921/149‑1 (MQ=255)
                                                                                                                                    gcAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCg                 >  3:129868/1‑149 (MQ=255)
                                                                                                                                      aGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCGt                >  1:53372/1‑149 (MQ=255)
                                                                                                                                      aGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCGt                <  2:53372/148‑1 (MQ=255)
                                                                                                                                        cGGAATGGGCAAggtgggtccgattccgtcacagataaaaacaatgcaggtgacttcgttcatgagtggacaaaacatgcattcaggcgagctaaagcggggcctgaagaaccgccatatccagttgatcgccctcggcggtgcgatt               >  5:240091‑M2/1‑12 (MQ=255)
                                                                                                                                          gAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAaga                                                                    <  2:157936/92‑1 (MQ=255)
                                                                                                                                          gAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAaga                                                                    >  1:157936/1‑92 (MQ=255)
                                                                                                                                          gAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCGTCAAcg           >  8:44169/1‑149 (MQ=255)
                                                                                                                                               ggCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCGTCAACGCGtt       <  7:113273/148‑1 (MQ=255)
                                                                                                                                                   aGGTGGTTACCTTGGGTTTCTTGTCGTCAGTTGCCGCCGGAGCGGGTCAACCAGGGGTTATCAAGAGTGCGCGGTACGCAAGTGGGTCACAGGTAATACGCGGCGCACTGTATACCCCTGCTAACGCGCAGGCGTCAACGCGTTGCATc  <  6:103072/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GGCGATCAACTGGATATGGCGGTTCTTCAGGCCCCGCTTTAGCTCGCCTGAATGCATGTTTTGTCCACTCATGAACGAAGTCACCTGCATTGTTTTTATCTGTGACGGAATCGGACCCACCGCGCTCGTGGCGCAGCGGAATGGGCAAGGTGGTTACCTTGGGTTTCTTGACCTCAGGTGCCGCCGGAGCGGGTCAACCAGGCGTGATCAAGAGTGCGCGGTACGCAAGAGGGTCACAGGTAAAACGCGGCGCACTGTATACCCCTGCAAACGCGCAGGCGTCAACGCGTTGCATC  >  NC_002947/5110634‑5110929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.