New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5196392	46 (0.870)	4 (0.080)	5/234	NT	7.7%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196417	53 (1.090)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1

CTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCACCGAA  >  NC_002947/5196271‑5196565                                                                                                                                                     |                                                                                                                                                     cggggtcaggCTGCAAGCGGTCCAGCGCCTGAGCGATTCGCTCCCTGGGCTCGCCTGGCGGCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGcg                                                                                                                                                    >  6:259079‑M2/5‑147 (MQ=255)    tgtCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGcggcg                                                                                                                                                 >  7:190448‑M2/1‑144 (MQ=255)         ctcgatgggctggaggtgtgatgaagccgcgaatcgaagtggtcgccatcgacagcctgatggtacgcctgttcaaccgtatcgatgaggtcaacatgccatggATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCAt                                                                                                                                            >  3:173999‑M1/105‑149 (MQ=255)           cTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGC‑GG‑CGTTcggcgagcattt                                                                                                                                          >  4:168183‑M2/1‑137 (MQ=255)              cAAGCCGTCCAGCGCCTTAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCAt                                                                                                                                        <  6:232579/148‑1 (MQ=255)                    gTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGt                                                                                                                                 <  4:182411/149‑1 (MQ=255)                       ggtgtgatgaagccgcgaatcgaagtggtcgccatcgacagcctgatggtacgcctgttcgaccgtatcgatgaggtcaacatgccatggATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGa                                                                                                                                                >  1:99760‑M1/91‑131 (MQ=255)                       ggtgtgatgaagccgcgaatcgaagtggtcgccatcgacagcctgatggtacgcctgttcgaccgtatcgatgaggtcaacatgccatggATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGa                                                                                                                                                <  2:99760‑M1/41‑1 (MQ=255)                                aGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGc                                                                                                                                                     >  5:93408‑M2/1‑116 (MQ=255)                                aGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGc                                                                                                                                                     <  6:93408‑M2/117‑2 (MQ=255)                                aGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATc                                                                                                                       <  7:237498/147‑1 (MQ=255)                                  cGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATa                                                                                                                   >  1:310418/1‑149 (MQ=255)                                        gcgcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTc                                                                                                              <  2:310418/148‑1 (MQ=255)                                                  cTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCg                                                                                                             <  2:194728/139‑1 (MQ=255)                                                  cTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCg                                                                                                             >  1:194728/1‑139 (MQ=255)                                                   tCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTAc                                                                                                  >  7:147450/1‑149 (MQ=255)                                                   tCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCAGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTa                                                                                                   >  5:343970/1‑148 (MQ=255)                                                    gccagggCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTAcc                                                                                                 <  4:61116/144‑1 (MQ=255)                                                      ccTGGCGCCAGCGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                                               <  6:343970/149‑1 (MQ=255)                                                        tGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATACTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCAt                                                                                               >  8:83517/1‑147 (MQ=255)                                                          gcgcGAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAgg                                                                                           <  7:334982/149‑1 (MQ=255)                                                            gcCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCt                                                                                         <  4:95763/149‑1 (MQ=255)                                                                  gCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGAt                                                                                   <  8:147450/149‑1 (MQ=255)                                                                   cAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                                                  <  7:270083/149‑1 (MQ=255)                                                                      aCTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCg                                                                               >  3:181420/1‑149 (MQ=255)                                                                         gCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGAc                                                                             >  2:128258/1‑148 (MQ=255)                                                                          cACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCa                                                                           >  3:116636/1‑149 (MQ=255)                                                                             cATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACtt                                                                        >  7:328331/1‑149 (MQ=255)                                                                              aTCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTc                                                                       <  1:128258/149‑1 (MQ=255)                                                                                 aGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGa                                                                     <  2:246062/148‑1 (MQ=255)                                                                                   cGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTc                                                                  >  7:126355/1‑149 (MQ=255)                                                                                       gtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgcg                                                               <  6:45747/148‑1 (MQ=255)                                                                                        tataAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGc                                                             >  5:66841/1‑149 (MQ=255)                                                                                          taAGACGGCGCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCt                                                            >  8:280049/1‑148 (MQ=255)                                                                                          taAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCg                                                                      >  1:19750/1‑138 (MQ=255)                                                                                          taAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCg                                                                      <  2:19750/138‑1 (MQ=255)                                                                                          taAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCtt                                                           >  5:114567/1‑149 (MQ=255)                                                                                           aaGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTAGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                                                <  7:21510/143‑1 (MQ=255)                                                                                           aaGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTAGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                                                >  8:21510/1‑143 (MQ=255)                                                                                            aGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtc                                                          <  8:328331/148‑1 (MQ=255)                                                                                             gACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtca                                                         >  3:60398/1‑148 (MQ=255)                                                                                                   aCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGc                                                                                                      <  5:22355/97‑1 (MQ=255)                                                                                                   aCCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGc                                                                                                      >  6:22355/1‑97 (MQ=255)                                                                                                        gTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAg                                             <  3:266853/149‑1 (MQ=255)                                                                                                        gTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAg                                             <  7:280049/149‑1 (MQ=255)                                                                                                           cAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGGACTGGCGGCGAGCATCCATGGCATGTTGCCCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGcc                                           >  1:64211/1‑149 (MQ=255)                                                                                                            aGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCa                                         >  4:181476/1‑149 (MQ=255)                                                                                                             gCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGCTGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCAt                                        >  6:341285/1‑149 (MQ=255)                                                                                                              cAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGAGACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCCCTTCGATTCGCGGCTTCATCACACCTCCCGCCCATc                                       >  3:134058/1‑149 (MQ=255)                                                                                                               aaaTGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATc                                       >  5:161128/1‑148 (MQ=255)                                                                                                                 atacTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAg                                    <  7:83517/146‑1 (MQ=255)                                                                                                                 ATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAg                                    >  6:114567‑M1/1‑149 (MQ=255)                                                                                                                   GCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAggg                                  <  1:121951‑M1/149‑1 (MQ=255)                                                                                                                    cTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcct                                   <  8:204396‑M2/147‑116 (MQ=255)                                                                                                                    cTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcct                                   >  7:204396‑M2/1‑32 (MQ=255)                                                                                                                     tCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctc                                                          <  8:137642‑M2/123‑93 (MQ=255)                                                                                                                     tCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctc                                                          >  7:137642‑M2/1‑31 (MQ=255)                                                                                                                     TCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATgg                                                                                 <  3:220318‑M1/100‑1 (MQ=255)                                                                                                                     TCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATgg                                                                                 >  4:220318‑M1/1‑100 (MQ=255)                                                                                                                       GCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTg                              <  5:10034‑M1/149‑1 (MQ=255)                                                                                                                        CCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTgg                             >  3:181476‑M1/1‑149 (MQ=255)                                                                                                                            aCGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGaa                         <  8:126355/149‑1 (MQ=255)                                                                                                                                 g‑cgcTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcat                                                        <  8:108990/113‑1 (MQ=255)                                                                                                                                 g‑cgcTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcat                                                        >  7:108990/1‑113 (MQ=255)                                                                                                                                 g‑cgcTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGc                    <  6:66841/149‑1 (MQ=255)                                                                                                                                      tCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAg                                    <  3:118470/129‑1 (MQ=255)                                                                                                                                      tCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAg                                    >  4:118470/1‑129 (MQ=255)                                                                                                                                      tCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCa                >  8:61752/1‑149 (MQ=255)                                                                                                                                        aaGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCa                                                                           >  2:173783/1‑88 (MQ=255)                                                                                                                                        aaGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCa                                                                           <  1:173783/88‑1 (MQ=255)                                                                                                                                           cgcCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCAccgcc           <  4:60398/149‑1 (MQ=255)                                                                                                                                              cGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACcgccgc         >  1:202625/1‑148 (MQ=255)                                                                                                                                                     gcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctggacggcttgcagcctgacacaggcagtggcggccgccgacacgaga    >  3:168183‑M2/1‑1 (MQ=255)                                                                                                                                                     gcggcgAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCACCGaa  <  2:64211/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCG‑CGCTCAAGCGCCGG‑CTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCACCGAA  >  NC_002947/5196271‑5196565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.