New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5290472 =71 (1.340)4 (0.080) 4/242 NT 5.3% coding (70/882 nt) PP_4664 LysR family transcriptional regulator
?NC_002947 5290501 = 74 (1.470)coding (99/882 nt) PP_4664 LysR family transcriptional regulator

AGAATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAG  >  NC_002947/5290357‑5290645
                                                                                                                                                |                                                                                                                                                
agaATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGc                                                                                                                                                >  8:250222/1‑147 (MQ=255)
  aaTCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGt                                                                                                                                            >  7:72770/1‑149 (MQ=255)
                  agccagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTgcgc                                                                                                                                        >  6:132563/1‑137 (MQ=255)
                  agccagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTgcgc                                                                                                                                        <  5:132563/137‑1 (MQ=255)
                  agccagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCgcgc                                                                                                                              <  5:194068/147‑1 (MQ=255)
                     cagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCGCCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATgg                                                                                                                         <  6:270446/149‑1 (MQ=255)
                     cagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATg                                                                                                                          >  7:14440/1‑148 (MQ=255)
                     cagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATg                                                                                                                          >  7:83126/1‑148 (MQ=255)
                      agccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTgcgc                                                                                                                                        >  3:156118/1‑133 (MQ=255)
                      agccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTgcgc                                                                                                                                        <  4:156118/133‑1 (MQ=255)
                      agccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTAGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATgg                                                                                                                         >  6:44748/1‑148 (MQ=255)
                        gccagccggcgttggttgtacgccacggcggttacgttccagcaagggaatgcccagtgatgcttccatggcgcgaatgcgcgcactggctGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCa                                                                                                                                              >  5:335722‑M1/92‑125 (MQ=255)
                        gccagccggcgttggttgtacgccacggcggttacgttccagcaagggaatgcccagtgatgcttccatggcgcgaatgcgcgcactggctGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCa                                                                                                                                              <  6:335722‑M1/34‑1 (MQ=255)
                          tctTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCa                                                                                                                    >  2:92952/1‑149 (MQ=255)
                              gCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCa                                                                                                                 <  8:72770/148‑1 (MQ=255)
                                cAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTg                                                                                                              >  1:147688/1‑149 (MQ=255)
                                 aGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCTATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                             <  1:92952/149‑1 (MQ=255)
                                 aGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGaa                                                                                                                       <  8:86751/139‑1 (MQ=255)
                                 aGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGaa                                                                                                                       >  7:86751/1‑139 (MQ=255)
                                 aGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                             <  8:139481/149‑1 (MQ=255)
                                        agCCACATGCATTTCGACTTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTcc                                                                                                      >  2:337423/1‑149 (MQ=255)
                                          ccACATGCATTTCGACTTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCt                                                                                                    <  1:337423/149‑1 (MQ=255)
                                            acaTGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTg                                                                                                  >  6:82082/1‑149 (MQ=255)
                                             caTGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGaa                                                                                                                       <  8:322809/127‑1 (MQ=255)
                                             caTGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGaa                                                                                                                       >  7:322809/1‑127 (MQ=255)
                                             caTGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGc                                                                                                 <  2:147688/149‑1 (MQ=255)
                                              aTGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCt                                                                                                >  5:306328/1‑149 (MQ=255)
                                                gCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCAt                                                                                                                   >  6:330499/1‑128 (MQ=255)
                                                   tttCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAAc                                                                                           <  8:83126/149‑1 (MQ=255)
                                                   tttCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAAc                                                                                           <  7:250222/149‑1 (MQ=255)
                                                     ggttacgttccagcaagggaatgcccagtgatgcttccatggcgcgaatgcgcgcactggctGCCGGCCGCAGCCATCTGTCACTGCCGGCAGc                                                                                                                                                >  7:321201‑M1/63‑94 (MQ=255)
                                                     ggttacgttccagcaagggaatgcccagtgatgcttccatggcgcgaatgcgcgcactggctGCCGGCCGCAGCCATCTGTCACTGCCGGCAGc                                                                                                                                                <  8:321201‑M1/32‑1 (MQ=255)
                                                      cGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCAGGCCGCAGCCATCTTTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGt                                                                                         >  7:228662/1‑148 (MQ=255)
                                                             aTCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAccgccg                                                                                 >  6:114720/1‑149 (MQ=255)
                                                                gACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTg                                                                               <  5:82082/148‑1 (MQ=255)
                                                                 aCCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGc                                                                                                 >  5:17552/1‑129 (MQ=255)
                                                                 aCCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGc                                                                                                 <  6:17552/129‑1 (MQ=255)
                                                                   cTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCg                                                                            >  5:229781/1‑148 (MQ=255)
                                                                   cTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCg                                                                            >  7:254626/1‑148 (MQ=255)
                                                                      aaGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTa                                                                          <  6:229781/147‑1 (MQ=255)
                                                                         cTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAAc                                                                                           >  8:4615/1‑127 (MQ=255)
                                                                         cTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAAc                                                                                           <  7:4615/127‑1 (MQ=255)
                                                                          tGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAcaacc                                                                     >  3:79998/1‑148 (MQ=255)
                                                                          tGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAcaacc                                                                     >  7:234601/1‑148 (MQ=255)
                                                                            ttCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCt                                                                                                <  2:315403/119‑1 (MQ=255)
                                                                            ttCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCt                                                                                                >  1:315403/1‑119 (MQ=255)
                                                                              ccAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGc                                                                >  5:272048/1‑149 (MQ=255)
                                                                              ccAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGc                                                                >  8:269084/1‑149 (MQ=255)
                                                                              ccAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGc                                                                >  6:124251/1‑149 (MQ=255)
                                                                               cAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAccgcc                                                                                  >  7:91343/1‑130 (MQ=255)
                                                                               cAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAccgcc                                                                                  <  8:91343/130‑1 (MQ=255)
                                                                                 gCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCgg                                                             <  8:14440/149‑1 (MQ=255)
                                                                                   acacCCTAGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCt                                                           <  5:44748/149‑1 (MQ=255)
                                                                                     acCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTgg                                                         >  7:191302/1‑149 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGc                                                                             >  8:332498/1‑127 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGc                                                                             <  7:332498/127‑1 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGc                                                        >  6:236748/1‑148 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGc                                                        >  5:347868/1‑148 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGc                                                        >  2:213254/1‑148 (MQ=255)
                                                                                        cTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCa                                                      <  8:228662/149‑1 (MQ=255)
                                                                                           gAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAgg                                                    <  6:272048/148‑1 (MQ=255)
                                                                                           gAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAg                                                     <  1:213254/147‑1 (MQ=255)
                                                                                           gAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGc                                                   <  5:236748/149‑1 (MQ=255)
                                                                                            aGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCa                                                  <  6:306328/149‑1 (MQ=255)
                                                                                                cGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCActc                                               <  5:102040/148‑1 (MQ=255)
                                                                                                  gCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTg                                            <  7:269084/149‑1 (MQ=255)
                                                                                                      cATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTgcag                                         >  2:167152/1‑148 (MQ=255)
                                                                                                       aTCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTgcagca                                       >  2:52558/1‑149 (MQ=255)
                                                                                                         cACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATg                                     >  4:285503/1‑149 (MQ=255)
                                                                                                          aCCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATg                                     >  7:194730/1‑148 (MQ=255)
                                                                                                              tggctgccggcagtgacagatggctgcggccggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGc                                                        <  6:335722‑M2/91‑1 (MQ=255)
                                                                                                              tggctgccggcagtgacagatggctgcggccggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGc                                                        >  5:335722‑M2/35‑125 (MQ=255)
                                                                                                              cTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACgg                                <  1:167152/149‑1 (MQ=255)
                                                                                                                gctgccggcagtgacagatggctgcggccggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAcc                                                                                     >  7:321201‑M2/33‑94 (MQ=255)
                                                                                                                gctgccggcagtgacagatggctgcggccggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAcc                                                                                     <  8:321201‑M2/62‑1 (MQ=255)
                                                                                                                         cgCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAcaa                                                                       >  8:193613/1‑99 (MQ=255)
                                                                                                                         cgCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAcaa                                                                       <  7:193613/99‑1 (MQ=255)
                                                                                                                         cgCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACg                       >  5:127310/1‑147 (MQ=255)
                                                                                                                            aGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACgcagca                  <  5:114720/149‑1 (MQ=255)
                                                                                                                            aGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACgcagca                  <  8:191302/149‑1 (MQ=255)
                                                                                                                             gCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGcagcag                 <  6:347868/149‑1 (MQ=255)
                                                                                                                               cATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGt               <  8:234601/149‑1 (MQ=255)
                                                                                                                               cATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGt               <  4:79998/149‑1 (MQ=255)
                                                                                                                                        cTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCt      <  1:52558/149‑1 (MQ=255)
                                                                                                                                           ccggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTg     >  7:3383‑M2/6‑147 (MQ=255)
                                                                                                                                           ccggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGc    <  8:194730‑M2/143‑1 (MQ=255)
                                                                                                                                            cggcAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAg  <  5:124251‑M2/145‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                
AGAATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAG  >  NC_002947/5290357‑5290645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.