New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5329487 =	66 (1.250)	4 (0.080)	3/242	NT	6.5%	coding (120/345 nt)	PP_4690	Rieske 2Fe‑2S family protein
	?	NC_002947	5329522 =	53 (1.050)					coding (155/345 nt)	PP_4690	Rieske 2Fe‑2S family protein

TTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTGCCACGAAGACAGCCAGGGCATC  >  NC_002947/5329374‑5329670                                                                                                                                                      |                                                                                                                                                     caactgctcaccctcacaggggcctgccacgcattcgccgctttctatcaggaacagcgcaccgtgatgggcgcagtggatgaggctggcgctgtcatccagaaacgcgtcctCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCaga                                                                                                                                                      >  1:277348‑M1/114‑149 (MQ=255) caactgctcaccctcacaggggcctgccacgcattcgccgctttctatcaggaacagcgcaccgtgatgggcgcagtggatgaggctggcgctgtcatccagaaacgcgtcctCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCaga                                                                                                                                                      >  7:283782‑M1/114‑149 (MQ=255)    cTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGTCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGa                                                                                                                                                   >  1:95947/1‑149 (MQ=255)    cTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGa                                                                                                                                                   >  1:104055/1‑149 (MQ=255)    cTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGa                                                                                                                                                   <  3:152789/149‑1 (MQ=255)        gTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAcgcg                                                                                                                                               >  2:285211/1‑149 (MQ=255)         tACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAcgc                                                                                                                                                >  5:116371/1‑147 (MQ=255)         tACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAcgc                                                                                                                                                <  6:116371/147‑1 (MQ=255)                 tCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAcgc                                                                                                                                                <  8:305439/139‑1 (MQ=255)                 tCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAcgc                                                                                                                                                >  7:305439/1‑139 (MQ=255)                  aggggcctgccacgcattcgccgctttctatcaggaacagcgcaccgtgatgggcgcagtggatgaggctggcgctgtcatccagaaacgcgtcctCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCagag                                                                                                                                                     <  8:171098‑M1/37‑1 (MQ=255)                  aggggcctgccacgcattcgccgctttctatcaggaacagcgcaccgtgatgggcgcagtggatgaggctggcgctgtcatccagaaacgcgtcctCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCagag                                                                                                                                                     >  7:171098‑M1/97‑133 (MQ=255)                    gCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGAc                                                                                                                                   <  5:151449/149‑1 (MQ=255)                             aGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGa                                                                                                                                       >  3:8822/1‑136 (MQ=255)                             aGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGa                                                                                                                                       <  4:8822/136‑1 (MQ=255)                                  cAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCAt                                                                                                                     >  7:151659/1‑149 (MQ=255)                                   aaaGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATc                                                                                                                    <  7:306264/149‑1 (MQ=255)                                     aGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCa                                                                                                                  <  5:84730/149‑1 (MQ=255)                                      gCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCGAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCAc                                                                                                                 <  1:285211/149‑1 (MQ=255)                                         gcgcCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAc                                                                                                                                                  >  2:146072/1‑113 (MQ=255)                                         gcgcCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGAc                                                                                                                                                  <  1:146072/113‑1 (MQ=255)                                          cgcCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTgcg                                                                                                             <  5:175929/149‑1 (MQ=255)                                             cTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTCCCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGcc                                                                                                           >  8:102384/1‑148 (MQ=255)                                             cTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGccc                                                                                                          <  3:173262/149‑1 (MQ=255)                                             cTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGcc                                                                                                           >  4:98655/1‑148 (MQ=255)                                                     tAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCATCCTCATCCACTGCGCCCATCACGGt                                                                                                  >  8:72040/1‑149 (MQ=255)                                                     tAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGt                                                                                                  <  2:104055/149‑1 (MQ=255)                                                                gAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTcc                                                                                        <  3:98655/148‑1 (MQ=255)                                                                gAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCt                                                                                       >  4:89603/1‑149 (MQ=255)                                                                    tGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATa                                                                                   <  7:72040/149‑1 (MQ=255)                                                                      ttCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAg                                                                                  <  8:151659/148‑1 (MQ=255)                                                                           cgtgcgtCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGaaa                                                                               >  3:291254/1‑146 (MQ=255)                                                                           cgtgcgtCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGaaa                                                                               <  4:291254/146‑1 (MQ=255)                                                                                gtCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTcc                                                                                        >  1:114708/1‑132 (MQ=255)                                                                                gtCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTcc                                                                                        <  2:114708/132‑1 (MQ=255)                                                                                 tCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAAt                                                                      <  3:89603/149‑1 (MQ=255)                                                                                   gCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGc                                                                    <  1:145899/149‑1 (MQ=255)                                                                                   gCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGc                                                                    >  2:145899/1‑149 (MQ=255)                                                                                     cAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACTGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGt                                                                  <  3:789/149‑1 (MQ=255)                                                                                      aaGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTg                                                                 >  6:214562/1‑149 (MQ=255)                                                                                            aGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGc                                                           <  5:214562/149‑1 (MQ=255)                                                                                             ggTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGcc                                                          >  3:265316/1‑149 (MQ=255)                                                                                                    ctgtaccGCAACCGCTGCCCGCACCGGGACATACCCGCTGAACTGGGCAGCGAACGCGTTTCTGGATGCCAGCGCCAGCCTCATCCACTCCGCCCATCCCGGTGCCCTGTTCCTGATACAAACCGGCGAATGCGt                                                                  >  1:218763/1‑135 (MQ=255)                                                                                                    ctgtaccGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGt                                                                  <  2:218763/134‑1 (MQ=255)                                                                                                     tgtaccGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAg                                                  >  6:27267/1‑149 (MQ=255)                                                                                                      gtaccGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAgg                                                 >  3:336598/1‑149 (MQ=255)                                                                                                       taccGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAgg                                                 <  1:35006/148‑1 (MQ=255)                                                                                                         ccGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGt                                               >  6:110486/1‑148 (MQ=255)                                                                                                         ccGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGt                                               >  2:127725/1‑148 (MQ=255)                                                                                                          cGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGt                                               >  5:573/1‑147 (MQ=255)                                                                                                          cGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGt                                               >  2:115242/1‑147 (MQ=255)                                                                                                           gCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATa                                                                                   >  1:304634/1‑110 (MQ=255)                                                                                                           gCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATa                                                                                   <  2:304634/110‑1 (MQ=255)                                                                                                           gCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGa                                                   >  5:132831/1‑142 (MQ=255)                                                                                                           gCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGa                                                   <  6:132831/142‑1 (MQ=255)                                                                                                           gCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAg                                            >  3:206898/1‑149 (MQ=255)                                                                                                              aCCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTg                                                                                                               <  2:112108/79‑1 (MQ=255)                                                                                                                 ctctgcccagttcagcgggatgtcccggtgcgggcagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCt                                                       <  8:171098‑M2/96‑1 (MQ=255)                                                                                                                 ctctgcccagttcagcgggatgtcccggtgcgggcagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCt                                                       >  7:171098‑M2/38‑133 (MQ=255)                                                                                                                  tctgcccagttcagcgggatgtcccggtgcgggcagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTg                                      >  1:277348‑M2/37‑149 (MQ=255)                                                                                                                  tctgcccagttcagcgggatgtcccggtgcgggcagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTg                                      >  7:283782‑M2/37‑149 (MQ=255)                                                                                                                    GCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAg                                   <  6:311515‑M1/149‑1 (MQ=255)                                                                                                                            cGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTggg                           <  4:336598/149‑1 (MQ=255)                                                                                                                              ggACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCGTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCt                         <  7:102384/149‑1 (MQ=255)                                                                                                                               gACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGGGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTg                        <  4:206898/149‑1 (MQ=255)                                                                                                                                   t‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTGCCAc                    <  5:110486/149‑1 (MQ=255)                                                                                                                                         cTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTGCCACGAAGa               <  2:95947/149‑1 (MQ=255)                                                                                                                                            aaCTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTGCCACGAAGACa             <  4:265316/148‑1 (MQ=255)                                                                                                                                                 ggcagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCtgt                                                     <  3:208080‑M2/98‑1 (MQ=255)                                                                                                                                                 ggcagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCtgt                                                     >  4:208080‑M2/6‑103 (MQ=255)                                                                                                                                                  gcagAGGACCCGTTTCTGGATGACAGCGCCACCCTCATCCACTGCGCCCATCACGGAGCGCTGTTCCTGATACAAAGCGCAGATTGCGTGGGAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCAGCCACGAAGACAGCcagtg      >  2:30048‑M2/5‑147 (MQ=255)                                                                                                                                                   cagAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGa                                             <  6:288986‑M2/106‑1 (MQ=255)                                                                                                                                                    agAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTgg                            >  4:217246‑M2/3‑125 (MQ=255)                                                                                                                                                     gAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTg                             >  4:4074‑M2/2‑123 (MQ=255)                                                                                                                                                     gAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTg                             <  3:4074‑M2/122‑1 (MQ=255)                                                                                                                                                     gAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTg                        >  2:223780‑M2/2‑128 (MQ=255)                                                                                                                                                     gAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTg                        <  1:223780‑M2/127‑1 (MQ=255)                                                                                                                                                      agGCCGCGTTTCTGGATGACTGCGCCAGCCTCATCCTCTGCGCGCATCACGGTGCGCTGGTCCTGATAGAAAGGGGCGAATGCTTGGCAGGCCCCTTTGAGGGTGAGCAGTTGCAGCCCCTGGGCTTCGACGAAGACAGCCAGGGCATc  <  1:30048/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAT‑CCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGCGCCAGCCTCATCCACTGCGCCCATCACGGTGCGCTGTTCCTGATAGAAAGCGGCGAATGCGTGGCAGGCCCCTGTGAGGGTGAGCAGTTGCAGCCCCTGGGCTGCCACGAAGACAGCCAGGGCATC  >  NC_002947/5329374‑5329670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.