New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5534166 =	46 (0.870)	4 (0.080)	3/242	NT	7.2%	coding (309/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5534223 =	59 (1.170)					coding (252/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein

ACCTGTGGGTTGGTGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTGCCCCAG  >  NC_002947/5534077‑5534362                                                                                                                                                    |                                                                                                                                            aCCTGTGGGTTGGTGGAGCCTGGGGTGATGGCGATCACGCCCGCGTCGTCATATACATCGGACGCCGGGATCGTGTTCGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGccac‑tgccacgga                                                                                                                                           >  2:334498/1‑148 (MQ=255)   gctgacaagatcaacgccgctggtggcgtgaatggcgagaaaatcgtcctggtcaaaggcgatgacgcctgtgaaccgaagcaagccGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGgctt                                                                                                                                         >  6:123886‑M1/88‑149 (MQ=255)   cTGTGGGTTGGTGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGgctt                                                                                                                                         >  6:104876/1‑149 (MQ=255)   cTGTGGGTTGGTGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGgctt                                                                                                                                         <  3:53859/149‑1 (MQ=255)         gTTGGTGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCg                                                                                                                                   <  7:31230/149‑1 (MQ=255)           gatcaacgccgctggtggcgtgaatggcgagaaaatcgtcctggtcaaaggcgatgacgcctgtgaaccgaagcaagccGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGgctt                                                                                                                                         <  6:192508‑M1/62‑1 (MQ=255)           gatcaacgccgctggtggcgtgaatggcgagaaaatcgtcctggtcaaaggcgatgacgcctgtgaaccgaagcaagccGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGgctt                                                                                                                                         >  5:192508‑M1/80‑141 (MQ=255)             gtggAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGtt                                                                                                                                >  8:194898/1‑148 (MQ=255)                gAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTcaca                                                                                                                            <  5:104876/149‑1 (MQ=255)                   ccTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGTTTCACAGGc                                                                                                                         <  5:118985/149‑1 (MQ=255)                   ccTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGAAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGc                                                                                                                         >  1:275038/1‑149 (MQ=255)                     tGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCg                                                                                                                        >  2:101722/1‑148 (MQ=255)                       gggTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCg                                                                                                                        <  1:101722/146‑1 (MQ=255)                          tGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCg                                                                                                                  >  7:105047/1‑149 (MQ=255)                                 gATCACTCCCGCCTCGTCATATACCTCGGACTCCGTGATCGTGTTTGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGtt                                                                                                                                <  8:284016/128‑1 (MQ=255)                                 gATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGtt                                                                                                                                >  7:284016/1‑128 (MQ=255)                                 gATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGa                                                                                                           >  6:162323/1‑149 (MQ=255)                                             cTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGAttt                                                                                               >  5:145834/1‑149 (MQ=255)                                                 tCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCGAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTtctc                                                                                           <  3:111976/149‑1 (MQ=255)                                                   atatACCTCGGACGCCGGGATCTTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGc                                                                                         <  4:10448/149‑1 (MQ=255)                                                        ccTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCAtt                                                                                     >  6:220043/1‑148 (MQ=255)                                                         cTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGa                                                                                                     <  6:54567/131‑1 (MQ=255)                                                         cTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGa                                                                                                     >  5:54567/1‑131 (MQ=255)                                                         cTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCa                                                                                   >  8:261143/1‑149 (MQ=255)                                                         cTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCa                                                                                   >  5:227240/1‑149 (MQ=255)                                                         cTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCa                                                                                   <  2:275038/149‑1 (MQ=255)                                                            ggACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACg                                                                                 <  7:194898/148‑1 (MQ=255)                                                                  cGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGccac                                                                             >  7:227393/1‑146 (MQ=255)                                                                  cGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGccac                                                                             <  8:227393/146‑1 (MQ=255)                                                                  cGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAg                                                                          <  7:214692/149‑1 (MQ=255)                                                                  cGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAg                                                                          >  8:214692/1‑149 (MQ=255)                                                                         gtgtTGGAGGAACAGAAGTGGCCCACCACGCGAATCACCTTGTCCTGATCGACCAGGCGGGTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGt                                                                    <  1:334498/148‑1 (MQ=255)                                                                         gtgtTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGtt                                                                   <  7:261143/149‑1 (MQ=255)                                                                              ggaggaACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCtt                                                                                                              >  7:125400/1‑101 (MQ=255)                                                                              ggaggaACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCtt                                                                                                              <  8:125400/101‑1 (MQ=255)                                                                                  gaACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAgcggc                                                                      <  4:71607/137‑1 (MQ=255)                                                                                  gaACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAgcggc                                                                      >  3:71607/1‑137 (MQ=255)                                                                                  gaACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGt                                                           >  5:273252/1‑148 (MQ=255)                                                                                     cAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGc                                                                                                                         >  2:14615/1‑83 (MQ=255)                                                                                     cAGAAGTGGCCCACCAAGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACAGGCCACGGCTTGCTTCGGTTCACAGGc                                                                                                                         <  1:14615/84‑1 (MQ=255)                                                                                      aagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATc                                                               <  6:192508‑M2/79‑1 (MQ=255)                                                                                      aagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATc                                                               >  5:192508‑M2/63‑141 (MQ=255)                                                                                      aagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGc                                                       >  6:123886‑M2/63‑149 (MQ=255)                                                                                           TGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGctgc                                                 <  7:284326‑M1/149‑1 (MQ=255)                                                                                              CCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGctgcctg                                              >  6:273252‑M1/1‑149 (MQ=255)                                                                                               CCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTCTCAGCCGctgcctgc                                             <  7:246270‑M1/149‑1 (MQ=255)                                                                                                caccacGCCAATCACCTTGTCCTGATCGTCCAGGCTGTTGGCCAC‑GGCCACGGGTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGTTTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTgcg                                            <  7:18976/149‑1 (MQ=255)                                                                                                  ccacGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCa                                          >  3:69860/1‑149 (MQ=255)                                                                                                        cAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCa                                          >  8:282891/1‑143 (MQ=255)                                                                                                        cAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCa                                          <  7:282891/143‑1 (MQ=255)                                                                                                        cAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTc                                    <  5:220043/149‑1 (MQ=255)                                                                                                         aaTCACCTTGTGCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACATTCGTCATCGCCTTTGACCATGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGt                                                           <  7:335182/125‑1 (MQ=255)                                                                                                         aaTCACCTTGTACTGATCGACCAGGCGGTTGGACAC‑GGCAACGGCTTGCTTAGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGACATTAACGCCACCACCGGCGATGATCTTGt                                                           >  8:335182/1‑125 (MQ=255)                                                                                                             aCCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTa                               <  5:162323/149‑1 (MQ=255)                                                                                                               cTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACt                             >  3:267665/1‑149 (MQ=255)                                                                                                                gtcgatcaggacaaggtgattggcgtggtgggccacGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTa                               <  5:123886‑M2/111‑1 (MQ=255)                                                                                                                  gTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCAc                                                                                  <  1:329323/93‑1 (MQ=255)                                                                                                                  gTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCAc                                                                                  >  2:329323/1‑93 (MQ=255)                                                                                                                   tCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGctgcct                                               <  1:160685/127‑1 (MQ=255)                                                                                                                   tCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGctgcct                                               >  2:160685/1‑127 (MQ=255)                                                                                                                     cTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGc                       <  6:145834/149‑1 (MQ=255)                                                                                                                      tGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCAc                                         <  1:317457/130‑1 (MQ=255)                                                                                                                      tGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCAc                                         >  2:317457/1‑130 (MQ=255)                                                                                                                        aTCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCa                     >  8:138369/1‑148 (MQ=255)                                                                                                                         tCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCaaa                   <  8:105047/149‑1 (MQ=255)                                                                                                                              cAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCTTTGATCTTGTCa                                                         <  3:139730/106‑1 (MQ=255)                                                                                                                              cAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATAGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGAGGCGTTGATCTTGTCa                                                         >  4:139730/1‑106 (MQ=255)                                                                                                                                ggCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCGTTTGACCAGGCCGATTTTCTCGCCATTCACGCCACCAGCGGGGTTGAGGTTGTCAGCCGCTGCGTGCGCCGCTGTCATGTCCTGCTCGCCCAAGGCTGCg            >  8:273727/1‑149 (MQ=255)                                                                                                                                 gCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGt           <  4:69860/149‑1 (MQ=255)                                                                                                                                    gTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTg        >  6:114420/1‑149 (MQ=255)                                                                                                                                     ttGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTGc       <  7:273727/149‑1 (MQ=255)                                                                                                                                     ttGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTGc       <  5:114420/149‑1 (MQ=255)                                                                                                                                          cac‑ggccacggcTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTGCCCCAg  >  8:292920/1‑149 (MQ=255)                                                                                                                                           ac‑ggccacggcTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTGCCCCat  >  4:48389/1‑147 (MQ=255)                                                                                                                                                    ggcTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTAc                              <  5:73250/112‑1 (MQ=255)                                                                                                                                                    ggcTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTAc                              >  6:73250/1‑112 (MQ=255)                                                                                                                                                    |                                                                                                                                            ACCTGTGGGTTGGTGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCAC‑GGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCCTTTGACCAGGACGATTTTCTCGCCATTCACGCCACCAGCGGCGTTGATCTTGTCAGCCGCTGCCTGCGCACCTTTCATGTACTGCTCGCCAAACGCTGCGTTTGCCCCAG  >  NC_002947/5534077‑5534362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.