New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1088549	72 (0.980)	7 (0.110)	7/250	8.6	10.1%	intergenic (+45/‑209)	pmbA/PP_0943	regulatory protease/hypothetical protein
	?	NC_002947	= 1088586	60 (0.900)					intergenic (+82/‑172)	pmbA/PP_0943	regulatory protease/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCACCTTTTTCTT  >  NC_002947/1088405‑1088694                                                                                                                                                  |                                                                                                                                                   gTTCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTacaacgg                                                                                                                                                >  2:155435/1‑145 (MQ=255) gTTCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACgg                                                                                                                                                 <  7:217997/148‑1 (MQ=255) gTTCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGATGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACgg                                                                                                                                                 >  8:217997/1‑148 (MQ=255)  ttCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACggtg                                                                                                                                               >  7:341319/1‑149 (MQ=255)  ttCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACggt                                                                                                                                                <  1:212840/148‑1 (MQ=255)   tctagcagATTGTCGCGATCGGGAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACggtg                                                                                                                                               <  2:91596/145‑1 (MQ=255)     cagcagATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACggtggt                                                                                                                                             <  8:226526/148‑1 (MQ=255)      agcagATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGTGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGTG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGgtggtg                                                                                                                                            <  7:401156/148‑1 (MQ=255)      agcagATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGtggtgg                                                                                                                                           <  2:247701/149‑1 (MQ=255)       gcagATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGTG‑CCGGACCTTTCGCGGGTAAACCCGCTCCTACACGgaggtg                                                                                                                                            >  8:401156/1‑147 (MQ=255)              gTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACAt                                                                                                                                   >  7:135911/1‑149 (MQ=255)                  cgATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCgg                                                                                                                                <  1:106413/149‑1 (MQ=255)                       ggTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTg                                                                                                                           <  1:422186/148‑1 (MQ=255)                       ggTAGCGATATTGAAACCCGTAGCAATATTCATACGGGCTCGGGGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGTGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTg                                                                                                                           <  3:303044/148‑1 (MQ=255)                         tAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGa                                                                                                                         >  4:20962/1‑148 (MQ=255)                                cTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGa                                                                                                                         >  1:374724/1‑141 (MQ=255)                                cTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGa                                                                                                                         <  2:374724/141‑1 (MQ=255)                                 ttGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCg                                                                                                                >  3:156163/1‑149 (MQ=255)                                   gAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGCGCGGATGACCGTTGCAGGTAGCTGAAATTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCGAGCCGGTGCTGGACGTACATCGGGGTTGGACACAGGCCggg                                                                                                              >  8:107499/1‑147 (MQ=255)                                   gAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGc                                                                                                                  <  8:286496/145‑1 (MQ=255)                                     aaCCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTg                                                                                                             <  8:57025/148‑1 (MQ=255)                                      aCCCGTAGCAATATTCATATGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTa                                                                                                           <  3:390799/149‑1 (MQ=255)                                       cccGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAg                                                                                                          <  3:20962/149‑1 (MQ=255)                                              cAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCggg                                                                                                   <  5:423820/149‑1 (MQ=255)                                                atatTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGtt                                                                                                 <  8:341319/149‑1 (MQ=255)                                                  atTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCa                                                                                               >  7:34557/1‑149 (MQ=255)                                                   ttCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTg                                                                                                                           <  6:367286/120‑1 (MQ=255)                                                   ttCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTg                                                                                                                           >  5:367286/1‑120 (MQ=255)                                                       tACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAgg                                                                                                                   <  3:19249/124‑1 (MQ=255)                                                       tACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAgg                                                                                                                   >  4:19249/1‑124 (MQ=255)                                                       tACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCAc                                                                                              <  6:397766/145‑1 (MQ=255)                                                       tACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCAc                                                                                              >  5:397766/1‑145 (MQ=255)                                                        aCGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGAcaca                                                                                                                     >  2:126635/1‑121 (MQ=255)                                                        aCGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGAcaca                                                                                                                     <  1:126635/121‑1 (MQ=255)                                                                   gtTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGGGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg                                                                               >  2:175492/1‑148 (MQ=255)                                                                    ttGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGaa                                                                             >  1:267187/1‑149 (MQ=255)                                                                            gCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTa                                                                     >  4:237766/1‑149 (MQ=255)                                                                               gATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTacac                                                                  <  3:237766/149‑1 (MQ=255)                                                                                aTGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACAcc                                                                 <  7:130064/149‑1 (MQ=255)                                                                                 tGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCt                                                                <  3:33460/149‑1 (MQ=255)                                                                                          cTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGc                                                        <  2:267187/148‑1 (MQ=255)                                                                                          cTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGc                                                        <  1:175492/148‑1 (MQ=255)                                                                                               aGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTAACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAAtac                                                  >  4:227539/1‑147 (MQ=255)                                                                                                 cTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCg                                                 >  4:307352/1‑148 (MQ=255)                                                                                                  tGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCg                                                 >  4:80623/1‑147 (MQ=255)                                                                                                    aTCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGaa                                               <  6:401148/147‑1 (MQ=255)                                                                                                     tCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTTCACGGTGGTGGACGTACATCGGGGTTGGACCCAGGCCGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAACTCCGAA‑GAc                                           >  1:97860/1‑149 (MQ=255)                                                                                                      cTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGc                                                                         >  4:336273/1‑119 (MQ=255)                                                                                                      cTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGc                                                                         <  3:336273/119‑1 (MQ=255)                                                                                                       tttAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GAccc                                         >  7:97772/1‑149 (MQ=255)                                                                                                       tttAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTACCTGCAAATCCGAA‑GAccc                                         >  8:164545/1‑149 (MQ=255)                                                                                                       tttAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCCGGGTAGGACACAGGCCCTTGTAGGAGCGGGTTGACCCGCGCAGAGGCCGGAACAGCACTACACCTGTCCCTGCAAATCCGAA‑GAccc                                         >  4:307395/1‑149 (MQ=38)                                                                                                          aGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGaa                                                                             <  8:73023/111‑1 (MQ=255)                                                                                                          aGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGaa                                                                             >  7:73023/1‑111 (MQ=255)                                                                                                              tGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTc                                  >  2:246348/1‑149 (MQ=255)                                                                                                                        ccTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGt                         >  5:312696/1‑149 (MQ=255)                                                                                                                             cgcgGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCGCGAGGGCCGGGtcttc                     <  8:97772/148‑2 (MQ=37)                                                                                                                                 ggTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTtc                <  2:362451/149‑1 (MQ=255)                                                                                                                                 ggTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACAAAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTAttt                 >  3:320189/1‑148 (MQ=255)                                                                                                                                    aaaCCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACGGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTtcat              >  4:226632/1‑148 (MQ=255)                                                                                                                                     aaCCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAAGGACCCGGCCCTCGCGCCGGGTTTTTATTtcatc             <  1:268594/149‑1 (MQ=255)                                                                                                                                      aCCCGCTCCTACACGGTGGTGGACGTACATCGGGGTGGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCAc           <  7:107499/149‑1 (MQ=255)                                                                                                                                       cccGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCAcc          >  3:339683/1‑149 (MQ=255)                                                                                                                                              cTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCAGCTTTTTCt   >  2:376207/1‑149 (MQ=255)                                                                                                                                              cTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCACCTTTTTCt   >  4:224724/1‑149 (MQ=255)                                                                                                                                               tACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                                                >  2:173499/1‑72 (MQ=255)                                                                                                                                               tACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                                                <  1:173499/72‑1 (MQ=255)                                                                                                                                               tACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCACCTTTTTCtt  >  8:263934/1‑149 (MQ=255)                                                                                                                                                acacGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGttt                       <  7:284480/127‑1 (MQ=255)                                                                                                                                                acacGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGttt                       >  8:284480/1‑127 (MQ=255)                                                                                                                                                acacGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCACCTTTTTCtt  >  4:423104/1‑148 (MQ=255)                                                                                                                                                 cacGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                                                >  3:285034/1‑70 (MQ=255)                                                                                                                                                 cacGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                                                <  4:285034/70‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   GTTCCAGCAGATTGTCGCGATCGGTAGCGATCTTGAAACCCGTAGCAATATTCATACGGGCTCGGTGTTGATCGAGCGGATGACCGTTGCTGGTAGCTGATCTTTAGCCTGCG‑CCGGCCCTTTCGCGGGTAAACCCGCTCCTACACGGTGGTGGACGTACATCGGGGTTGGACACAGGCCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGCACTACACCTTTCCCTGCAAATCCGAA‑GACCCGGCCCTCGCGCCGGGTTTTTATTTCATCACCTTTTTCTT  >  NC_002947/1088405‑1088694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.