New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 198457 | 52 (0.880) | 5 (0.090) | 4/254 | NT | 9.1% | coding (3963/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | = 199796 | 50 (0.880) | coding (5302/26049 nt) | PP_0168 | putative surface adhesion protein |
CGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/198307‑198457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCA < NC_002947/199796‑199650 CGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGC < 7:279605/149‑1 gcgaagCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACGGTGGTGCCGTCGGTCAGCTT < 8:152220/142‑1 CCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAG < 1:133504/141‑1 CCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAG > 2:133504/1‑141 CAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCGG > 5:356257/1‑76 CAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCGG < 6:356257/76‑1 GCTGCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCAC < 4:235012/149‑1 GCTGCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCAC > 4:308262/1‑149 GCTGCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCAC > 6:332207/1‑149 TGCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCA > 4:347874/1‑149 CGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/198307‑198457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCACGACGACAGTGGTGCCGTCGGTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCA < NC_002947/199796‑199650 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |