| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 205042 = | 7 (0.120) | 15 (0.260) | 5/254 | NT | 68.9% | coding (10548/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 207783 = | NA (NA) | coding (13289/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/205193‑205042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTAC > NC_002947/207783‑207927 CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTG > 6:327768/1‑149CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTG > 4:185407/1‑149 TTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCG‑TTGGCCGGCACGGTGATGACGG‑TTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTG > 6:246148/1‑149 CAACGGTTGCGATCGTTTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGT < 1:286508/148‑1 CCCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTT > 8:271185/1‑149 CCCACGGTGCCG‑TTGGCCGGCACAGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTT > 6:200145/1‑149 CCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACCGTGACTGCTCCGGACAAC < 2:13821/100‑1 CCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACCGTGACTGCTCCGGACAAC > 1:13821/1‑100 CCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTT > 5:112917/1‑148 CCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCCACCGTCACTGCCCAGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTT > 4:354054/1‑148 CCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTG > 7:59741/1‑149 CCACGGTGCCA‑TTAGCCGACACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGA < 5:5681/128‑1 CCACGGTGCCA‑TTAGCCGACACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGA > 6:5681/1‑128 CACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTG > 1:249408/1‑148 CACGGTGCCA‑TTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTG > 4:100982/1‑148 ACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTG > 1:65221/1‑147 CGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCAATGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAG < 2:249408/149‑1 ATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGA < 3:100982/148‑1 GTGAAGGTCAATGCACTGGGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGAGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCG < 7:79775/149‑1 GTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTAC < 6:32388/149‑1 GTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTAC < 1:259216/149‑1 TGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATC > 5:24073/1‑62 TGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATC < 6:24073/62‑1 CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCG‑TTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/205193‑205042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTAC > NC_002947/207783‑207927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |