| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 205042 = | 7 (0.120) | 15 (0.260) | 5/254 | NT | 68.9% | coding (10548/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 207783 = | NA (NA) | coding (13289/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
AGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGG > NC_002947/204897‑205113 | gtaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacagggtcgttggtgccaacgtagacgttgtccggggcagtcacggtggcagtacCcac < 6:32388‑M1/4‑1 (MQ=255)gtaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacagggtcgttggtgccaacgtagacgttgtccggggcagtcacggtggcagtacCcac < 1:259216‑M1/4‑1 (MQ=255) gCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACcaca < 3:118453/149‑1 (MQ=255) gCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCa < 7:209515/149‑1 (MQ=255) gTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCAtt > 8:282606/1‑148 (MQ=255) gTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTg < 3:348810/149‑1 (MQ=255) gTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTg < 1:133547/149‑1 (MQ=255) gCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCt > 7:292474/1‑148 (MQ=255) cggggtcttgtccagcgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatctcagggtcgttggtgccgacgtagacgttgtccggggcagtgacagtggcagtacCCCCAGTGCATTGACCTTCAc < 7:79775‑M1/21‑1 (MQ=255) gTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCt > 2:6825/1‑149 (MQ=39) tACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCACTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCATGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCaaaa < 2:220621/149‑1 (MQ=11) tcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacagggtcgttggtgccgacgtagacgttgtccggggcagtgacagtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGtcat < 3:100982‑M1/45‑1 (MQ=255) ctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgcCCACAGTGCATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCg < 2:249408‑M1/68‑1 (MQ=255) caacggttgcgatcgatttgatcacagggtcgttggtgccgacgtagacgttgtccggggcagtgacagtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTg > 4:100982‑M1/79‑148 (MQ=255) caacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgcCCACAGTGCATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg > 7:59741‑M1/79‑149 (MQ=255) caacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgcCCACAGTGCATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTg > 1:249408‑M1/79‑148 (MQ=255) caacggtagcgatcgacatcacgacagggtcgttggtaccgacgtagacgttgtccggagcagtcacggtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGt > 1:65221‑M1/79‑147 (MQ=255) aacggttgcgatcgacatcacgacagggtcgttggtaccgacgtagacattgtcctgggcagtgacggtggcagtgcCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg > 4:354054‑M1/78‑148 (MQ=255) aacggttgcgatcgacatcacgacagggtcgttggtaccgacgtagacattgtccggggcagtgacggtggcagtgcCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg > 5:112917‑M1/78‑148 (MQ=255) aacggttgcgatcgacatcacgacagggtcgttagcgccgacgtagacgttgtccggagcagtcacggtggcagtgcCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTggg > 6:200145‑M1/78‑149 (MQ=255) aacggtagcgatcgacatcacgacagggtcgttggtaccgacgtagacgttgtccggagcagtcacggtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTggg > 8:271185‑M1/78‑149 (MQ=255) gatcacagggtcgttggtgccaacgtagacgttgtccggggcagtcacggtggcagtacCca < 6:24073‑M1/3‑1 (MQ=255) gatcacagggtcgttggtgccaacgtagacgttgtccggggcagtcacggtggcagtacCca > 5:24073‑M1/60‑62 (MQ=255) tcacagggtcgttggtgccaacgtagacgttgtccggggcagtcacggtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGTCGGCTAATGGCACCGTgg > 6:5681‑M1/58‑128 (MQ=255) tcacagggtcgttggtgccaacgtagacgttgtccggggcagtcacggtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGTCGGCTAATGGCACCGTgg < 5:5681‑M1/71‑1 (MQ=255) gttgtccggagcagtcacggtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg < 2:13821‑M1/71‑1 (MQ=255) gttgtccggagcagtcacggtggcagtacCCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg > 1:13821‑M1/30‑100 (MQ=255) | AGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGG > NC_002947/204897‑205113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |