| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 588324 | 81 (1.380) | 4 (0.070) | 4/248 | NT | 5.1% | coding (322/876 nt) | PP_0498 | hypothetical protein |
| ? | NC_002947 | = 588349 | 72 (1.290) | coding (297/876 nt) | PP_0498 | hypothetical protein | |||||
ACTGCGGGACAGATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/588170‑588324‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagCGAGCCAGGCGCAATGGCGCCGTCACTGGCGACGAACCTTGATGAAGCACAGCGTTTCCACGCGCATATCGCGCCTCGATGCCGAACGCTCATAGGCCATAGCCTTGGCGGGGCAATTACGCTTAAGCTTGCAGCACAGTTGCCAC < NC_002947/588349‑588204 ACTGCGGGACAGATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGT > 6:130462/1‑149 TGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGCGAGCCAGGCGCAATGGCG > 7:193102/1‑149 GCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCA > 1:317945/1‑117 GCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCA < 2:317945/117‑1 TGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGCGAGCCAGGCGCAATGGCGCCGTCACTGGCG < 1:32040/139‑1 TGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGCGAGCCAGGCGCAATGGCGCCGTCACTGGCG > 2:32040/1‑139 CAAGCTTAAGCGAAAATGCCCCCCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGATCGTCGCCAGCGAGCCAGGCGCAATGGCGCCGTCACTGGCGACGAACCTTGAT < 7:245630/149‑1 TTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCA > 5:187080/1‑100 TTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCA < 6:187080/100‑1 GCCAGCGAGCCAGGCGCAATGGCGCCGTCACTGGCGACGAACCTTGATGAAGCACAGCGTTTCCACGCGCATATCGCGCCTCGATGCCGAACGCTCATAGGCCATAGCCTTGGCGGGGCAATTACGCTTA < 7:305890/130‑1 GCCAGCGAGCCAGGCGCAATGGCGCCGTCACTGGCGACGAACCTTGATGAAGCACAGCGTTTCCACGCGCATATCGCGCCTCGATGCCGAACGCTCATAGGCCATAGCCTTGGCGGGGCAATTACGCTTA > 8:305890/1‑130 GCGAGCCAGGCGCAATGGCGCCGTCACTGGCGACGAACCTTGATGAAGCACAGCGTTTCCACGCGCATATCGCGCCTCGATGCCGAACGCTCATAGGCCATAGCCTTGGCGGGGCAATTACGCTTAAGCTTGCAGCACAGTTGCCAC > 5:337505/1‑147 ACTGCGGGACAGATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/588170‑588324‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagCGAGCCAGGCGCAATGGCGCCGTCACTGGCGACGAACCTTGATGAAGCACAGCGTTTCCACGCGCATATCGCGCCTCGATGCCGAACGCTCATAGGCCATAGCCTTGGCGGGGCAATTACGCTTAAGCTTGCAGCACAGTTGCCAC < NC_002947/588349‑588204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |