New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 58832481 (1.380)4 (0.070) 4/248 NT 5.1% coding (322/876 nt) PP_0498 hypothetical protein
?NC_002947 = 588349 72 (1.290)coding (297/876 nt) PP_0498 hypothetical protein

CAGATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGAATGCGG  >  NC_002947/588179‑588470
                                                                                                                                                 |                                                                                                                                                   
cAGATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGa                                                                                                                                                  >  8:197706/1‑149 (MQ=255)
  gATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGTAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACg                                                                                                                                                >  7:348753/1‑149 (MQ=255)
   aTCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACgg                                                                                                                                               >  8:9802/1‑149 (MQ=255)
   aTCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACgg                                                                                                                                               >  4:293512/1‑149 (MQ=255)
        tACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCa                                                                                                                                          >  3:14153/1‑149 (MQ=255)
          cGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCAtt                                                                                                                                        <  1:68658/149‑1 (MQ=255)
            aTGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTgc                                                                                                                                      <  5:323948/149‑1 (MQ=255)
                tGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGcgagccaggcgcaatggcg                                                                                                                                  >  7:193102‑M1/1‑130 (MQ=255)
                  tCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTgg                                                                                                                                >  4:345153/1‑149 (MQ=255)
                   ccACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGATATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGc                                                                                                                               >  6:81860/1‑149 (MQ=255)
                    cACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCt                                                                                                                              <  4:324831/149‑1 (MQ=255)
                    cACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCt                                                                                                                              <  8:132199/149‑1 (MQ=255)
                     aCTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTc                                                                                                                             >  6:237194/1‑149 (MQ=255)
                         gtgGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGc                                                                                                                           >  5:337505‑M2/1‑146 (MQ=255)
                              aaCTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAg                                                                                                                    >  5:343753/1‑149 (MQ=255)
                              aaCTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAg                                                                                                                    >  4:78231/1‑149 (MQ=255)
                              aaCTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAg                                                                                                                    >  5:160622/1‑149 (MQ=255)
                                 tattctgcAAGCTTATGCGTAATTGCCCCGCCTCTGCTTTGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTAGCTGGCTAGGCt                                                                                                                 <  4:260411/145‑1 (MQ=255)
                                   tgctgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCtgt                                                                                                               <  8:10361/149‑1 (MQ=255)
                                     ctgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCtgtg                                                                                                              <  6:118941/148‑1 (MQ=255)
                                     ctgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCtgtg                                                                                                              <  7:278971/148‑1 (MQ=255)
                                     ctgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCt                                                                                                                 >  3:260411/1‑145 (MQ=255)
                                      tgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGcgagccaggcgcaatggcgccgtcactggcg                                                                                                                      >  2:32040‑M1/1‑108 (MQ=255)
                                      tgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGcgagccaggcgcaatggcgccgtcactggcg                                                                                                                      <  1:32040‑M1/139‑32 (MQ=255)
                                      tgcAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGAc                                                                                                            >  4:126125/1‑149 (MQ=255)
                                        cAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGAcc                                                                                                           <  3:293512/148‑1 (MQ=255)
                                        cAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCt                                                                                                          >  5:269531/1‑149 (MQ=255)
                                        cAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCt                                                                                                          <  1:182503/149‑1 (MQ=255)
                                        cAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCt                                                                                                          >  2:182503/1‑149 (MQ=255)
                                        cAAGCTTAAGCGAAAATGCCCCCCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGATCGTCGCCAGcgagccaggcgcaatggcgccgtcactggcgacgaaccttgat                                                                                                          <  7:245630‑M1/149‑44 (MQ=255)
                                           gCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGAc                                                                                                       <  3:78231/149‑1 (MQ=255)
                                            cTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACa                                                                                                      <  5:237194/149‑1 (MQ=255)
                                             ttAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGa                                                                                                        >  1:185491/1‑146 (MQ=255)
                                             ttAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGa                                                                                                        >  7:90185/1‑146 (MQ=255)
                                              tAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGctggc                                                                                                                       >  8:305890‑M2/1‑125 (MQ=255)
                                              tAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGctggc                                                                                                                       <  7:305890‑M2/130‑6 (MQ=255)
                                                 gCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTg                                                                                                 >  2:310732/1‑149 (MQ=255)
                                                  cGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTTGCTGGCGAGGCTGTGACCTGACAGATTGc                                                                                                <  1:27500/149‑1 (MQ=255)
                                                     aaTTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCag                                                                                             >  6:41361/1‑149 (MQ=255)
                                                      aTTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagt                                                                                            <  6:269531/149‑1 (MQ=255)
                                                       ttGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtg                                                                                           <  7:105834/149‑1 (MQ=255)
                                                       ttGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagt                                                                                            >  3:307231/1‑148 (MQ=255)
                                                       ttGCCCAGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGGGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtg                                                                                           <  7:254630/149‑1 (MQ=255)
                                                         gCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtga                                                                                          <  7:197706/148‑1 (MQ=255)
                                                          ccccGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtgagt                                                                                        <  7:9802/149‑1 (MQ=255)
                                                           cccGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCGAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGAGCTGACTGATTGCCagtgagt                                                                                        >  4:88188/1‑148 (MQ=255)
                                                           cccGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtgagt                                                                                        >  5:100512/1‑148 (MQ=255)
                                                           cccGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtgagt                                                                                        >  4:65328/1‑148 (MQ=255)
                                                           cccGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtgagt                                                                                        >  5:33863/1‑148 (MQ=255)
                                                                 aaGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCaa                                                                                 >  1:347601/1‑149 (MQ=255)
                                                                      tATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtga                                                                                          >  1:154866/1‑135 (MQ=255)
                                                                      tATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCagtga                                                                                          <  2:154866/135‑1 (MQ=255)
                                                                       aTGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCcg                                                                          >  8:158006/1‑149 (MQ=255)
                                                                        tGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCcgc                                                                         <  8:90185/149‑1 (MQ=255)
                                                                               tGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACATGACAGATTTCCAGTGAGTGAACCAATGCCCTCGGcgggc                                                                  >  8:154220/1‑145 (MQ=255)
                                                                                gAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTg                                                                   >  5:295007/1‑147 (MQ=255)
                                                                                 aGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCa                                                                 <  5:41361/148‑1 (MQ=255)
                                                                                 aGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCa                                                                 <  3:233199/148‑1 (MQ=255)
                                                                                  gCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAgg                                                               <  8:68504/149‑1 (MQ=255)
                                                                                   cGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGc                                                              <  6:160622/149‑1 (MQ=255)
                                                                                          cATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       <  3:126125/149‑1 (MQ=255)
                                                                                           aTCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       >  8:1557/1‑148 (MQ=255)
                                                                                           aTCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       >  2:231349/1‑148 (MQ=255)
                                                                                              gAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAgg                                                   <  3:367421/149‑1 (MQ=255)
                                                                                              gAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAgg                                                   <  2:347601/149‑1 (MQ=255)
                                                                                              gAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAgg                                                   <  6:343753/149‑1 (MQ=255)
                                                                                               aGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAggg                                                  <  4:307231/149‑1 (MQ=255)
                                                                                                ggCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAgggg                                                 <  7:1557/149‑1 (MQ=255)
                                                                                                  cgcgATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGt                                               <  6:100512/149‑1 (MQ=255)
                                                                                                   gcgATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATAGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGt                                               <  1:231349/149‑1 (MQ=255)
                                                                                                   gcgATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGtt                                              >  8:310392/1‑149 (MQ=255)
                                                                                                   gcgATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGtt                                              <  3:345153/149‑1 (MQ=255)
                                                                                                          gcgcGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       <  6:82251/133‑1 (MQ=255)
                                                                                                          gcgcGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       >  3:206652/1‑133 (MQ=255)
                                                                                                          gcgcGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       >  5:82251/1‑133 (MQ=255)
                                                                                                          gcgcGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAg                                                       <  4:206652/133‑1 (MQ=255)
                                                                                                           cgcgTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCgg                                       <  2:185491/148‑1 (MQ=255)
                                                                                                            gcgTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGt                                     <  1:310732/149‑1 (MQ=255)
                                                                                                                  taaCGCTGTGCTTCATCTATGTTCGGCGCGAGTGACGGCGCCTTTGCGCCTGGCGCGCTGGCGTGGGTGTGTCGTGACAGTTTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTc                               <  8:348753/148‑1 (MQ=255)
                                                                                                                     cGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGa                            <  6:33863/149‑1 (MQ=255)
                                                                                                                           gCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAAcgcgc                      >  4:75333/1‑149 (MQ=255)
                                                                                                                            cTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAAcgcgcg                     >  6:300082/1‑149 (MQ=255)
                                                                                                                                atcaAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGctggcgacgatccttgatgaagcacagcgtttccacgcgcatatcgcgcctcgatgccgaacgctcataggccatagccttgggggggcattttcgcttaagcttg                  <  7:245630‑M2/149‑107 (MQ=255)
                                                                                                                                atcaAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGAGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGcccc                 >  2:46583/1‑149 (MQ=255)
                                                                                                                                 tcaAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGccccc                >  8:258635/1‑149 (MQ=255)
                                                                                                                                 tcaAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGccccc                >  7:66806/1‑149 (MQ=255)
                                                                                                                                    aGGTTCGTCTCCCGTGACGGCGCCATTGCGCCTGGCTCGCTGTCGAGGCTGTGCCCGGACATATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGGAGGTGGTTGAGCCGGTTAAAGTCGGAACGCGCGCCCCCCaa             <  8:285656/149‑1 (MQ=255)
                                                                                                                                          gtcgCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGaa       >  2:53853/1‑149 (MQ=255)
                                                                                                                                           tcgCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGa        >  4:39128/1‑147 (MQ=255)
                                                                                                                                           tcgCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGa        <  3:39128/147‑1 (MQ=255)
                                                                                                                                           tcgCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGAAt      <  5:130462/149‑1 (MQ=255)
                                                                                                                                            cgCCAGTGACGGCGCCATTGCGCCTGGCTCGctggcgacgaaccttgatgaagcacagcgtttccacgcgcatatcgcgcctcgatgccgaacgctcataggccatagccttggcggggcaattacgcttaagcttgca                <  1:32040‑M2/139‑109 (MQ=255)
                                                                                                                                            cgCCAGTGACGGCGCCATTGCGCCTGGCTCGctggcgacgaaccttgatgaagcacagcgtttccacgcgcatatcgcgcctcgatgccgaacgctcataggccatagccttggcggggcaattacgcttaagcttgca                >  2:32040‑M2/1‑31 (MQ=255)
                                                                                                                                             gCCAGcgagccaggcgcaatggcgccgtcactggcgacgaaccttgatgaagcacagcgtttccacgcgcatatcgcgcctcgatgccgaacgctcataggccatagccttggcggggcaattacgctta                        <  7:305890‑M1/130‑126 (MQ=255)
                                                                                                                                             gCCAGcgagccaggcgcaatggcgccgtcactggcgacgaaccttgatgaagcacagcgtttccacgcgcatatcgcgcctcgatgccgaacgctcataggccatagccttggcggggcaattacgctta                        >  8:305890‑M1/1‑5 (MQ=255)
                                                                                                                                              ccAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTAAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGAATGCg   >  3:223626/1‑149 (MQ=255)
                                                                                                                                                 gcgagccaggcgcaatggcgccgtcactggcgacgaaccttgatgaagcacagcgtttccacgcgcatatcgcgcctcgatgccgaacgctcataggccatagccttggcggggcaattacgcttaagcttgcagcacagttgccac   >  5:337505‑M1/1‑1 (MQ=255)
                                                                                                                                                 gTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGAATGCgg  >  1:1286/1‑147 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CAGATCAATACGATGCTGTCCACTTGTGGCAACTGTGCTGCAAGCTTAAGCGTAATTGCCCCGCCAAGGCTATGGCCTATGAGCGTTCGGCATCGAGGCGCGATATGCGCGTGGAAACGCTGTGCTTCATCAAGGTTCGTCGCCAGTGACGGCGCCATTGCGCCTGGCTCGCTGGCGAGGCTGTGACCTGACAGATTGCCAGTGAGTGAACCAATGCCCGCGGCTTGCAGGCGATAAAGCAGGGGGTTGAGCCGGGTAAAGTCGGAACGCGCGCCCCCCAAGACGAATGCGG  >  NC_002947/588179‑588470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.