New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 855438	47 (0.800)	3 (0.050)	3/250	NT	6.9%	coding (289/798 nt)	murI	glutamate racemase
	?	NC_002947	= 855501	36 (0.640)					coding (352/798 nt)	murI	glutamate racemase

AAGTCGCCGGACTATATCCGCGAGCGCTGCCGACGCATTGCCGGGTTCTTCCATGAACAAGGCGCAAAGGCCATGGTCCTGGCCTGCAACACTGCCAC‑GGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/855288‑855438 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCTTGACGGCCGGTTCCATGCCCACCAACGGCCAGGTCGGATACAACTCACGCAGGTCGGCCACTGCCGCCACCGTGGCAGTGTTGCAGGCCAGGACCATGGCCTT  <  NC_002947/855501‑855354                                                                                                                                                                                                                                                                                                              AAGTCGCCGGACTATATCCGCGAGCGCTGCCGACGCATTGCCGGGTTCTTCCATGAACAAGGCGCAAAGGCCATGGTCCTGGCCTGCAACACTGCCAC‑GGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGT                                                                                                                                                        >  1:177774/1‑149    TCGCCGGACTATATCCGCGAGCGCTGCCGACGCATTGCCGGGTTCTTCCATGAACAAGGCGCAAAGGCCATGGTCCTGGCCTGCAACACTGCCAC‑GGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGC                                                                                                                                                     >  8:265363/1‑149                                                 TTCCATGAACAAGGCGCAAAGGCCATGGTCCTGGCCTGCAACACTGCCACGGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCT                                                                                                         >  1:276171/1‑149                                                                        CATGGTCCTGGCCTGCAACACTGCCAC‑GGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCTTGACGGCCGGTTCCATGCCCACCA                                                                                 <  7:265363/149‑1                                                                             TCCTGGCCTGCAACACTGCCAC‑GGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCTTGACGGCCGGTTCCATGCCCACCAACGGC                                                                            <  2:276171/149‑1                                                                                                                                                       GGCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCTTGACGGCCGGTTCCATGCCCACCAACGGCCAGGTCGGATACAACTCACGCAGGTCGGCCACTGCCGCCACCGTGGCAGTGTTGCAGGCCAGGACCATGGCCT   >  7:205537/1‑149                                                                                                                                                        GCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCTTGACGGCCGGTTCCATGCCCACCAACGGCCAGGTCGGATACAACTCACGCAGGTCGGCCACTGCCGCCACCGTGGCAGTGTTGCAGGCCAGGACCATGGCCTT  >  3:54711/1‑149                                                                                                                                                                                                                                                                                                              AAGTCGCCGGACTATATCCGCGAGCGCTGCCGACGCATTGCCGGGTTCTTCCATGAACAAGGCGCAAAGGCCATGGTCCTGGCCTGCAACACTGCCAC‑GGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/855288‑855438 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggCCAGCACACCGACCACGCCCGAGCGGGTGGCTGCCGCTGCAGGCTTGACGGCCGGTTCCATGCCCACCAACGGCCAGGTCGGATACAACTCACGCAGGTCGGCCACTGCCGCCACCGTGGCAGTGTTGCAGGCCAGGACCATGGCCTT  <  NC_002947/855501‑855354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.