New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 855438	47 (0.800)	3 (0.050)	3/250	NT	6.9%	coding (289/798 nt)	murI	glutamate racemase
	?	NC_002947	= 855501	36 (0.640)					coding (352/798 nt)	murI	glutamate racemase

AAAGGCCATGGTCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCTGGTAAGCCCGGCGGTGCGCCAGCTGCT  >  NC_002947/855353‑855649                                                                                                                                                     |                                                                                                                                                     aaaGGCCATGGTCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTgg                                                                                                                                                      <  2:152305/149‑1 (MQ=255)  aaGGCCATGGTCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGc                                                                                                                                                     >  3:54711‑M2/1‑148 (MQ=255)   aGGCCATGGTCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGcc                                                                                                                                                    >  7:205537‑M2/1‑147 (MQ=255)           gTCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCg                                                                                                                                             <  7:199953/148‑1 (MQ=255)            tCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCgg                                                                                                                                            >  1:133591/1‑148 (MQ=255)                 gCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTAccc                                                                                                                                       <  6:245359/148‑1 (MQ=255)                 gCCTGCAACACTGCCACGGTGGCGGCAGTGACCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTgg                                                                                                                                                      <  5:345131/133‑1 (MQ=255)                 gCCTGCAACACTGCCACGGTGGCGGCAGTGACCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTgg                                                                                                                                                      >  6:345131/1‑133 (MQ=255)                      cAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCaga                                                                                                                                 <  7:265422/149‑1 (MQ=255)                      cAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCaga                                                                                                                                 <  7:26312/149‑1 (MQ=255)                      cAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCaga                                                                                                                                 <  7:243905/149‑1 (MQ=255)                           cTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGcc                                                                                                                            <  8:196144/149‑1 (MQ=255)                                      gcggcAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGc                                                                                                                 <  2:133591/149‑1 (MQ=255)                                                ccGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGAt                                                                                                       >  2:46539/1‑149 (MQ=255)                                                        cGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTc                                                                                                 <  1:144839/147‑1 (MQ=255)                                                          tGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCt                                                                                                           <  7:317054/135‑1 (MQ=255)                                                          tGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCt                                                                                                           >  8:317054/1‑135 (MQ=255)                                                           gAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCaaa                                                                                            >  4:174613/1‑149 (MQ=255)                                                                  aTCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTa                                                                                     >  5:69258/1‑149 (MQ=255)                                                                       aCCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGt                                                                                <  2:119476/149‑1 (MQ=255)                                                                        ccTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGt                                                                                >  8:92657/1‑148 (MQ=255)                                                                           ggCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGGGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGttat                                                                             >  6:127543/1‑148 (MQ=255)                                                                            gCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGccaccaacggccaggtcggatacaactcacgcaggtcggccactgccgccaccgtggcagtgttgcaggccagga                                                                           <  2:276171‑M2/149‑76 (MQ=255)                                                                                 tggtggGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGccaccaacggccaggtcggatacaactcacgcaggtcggccactgccgccaccgtggcagtgttgcaggccaggaccatg                                                                      <  7:265363‑M2/149‑81 (MQ=255)                                                                                 tggtggGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGttatt                                                                            <  5:233453/143‑1 (MQ=255)                                                                                 tggtggGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGttatt                                                                            >  6:233453/1‑143 (MQ=255)                                                                                      ggCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCtt                                                                  <  7:92657/148‑1 (MQ=255)                                                                                       gCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGc                                                                >  5:176496/1‑149 (MQ=255)                                                                                         aTGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGccc                                                              >  6:372243/1‑149 (MQ=255)                                                                                             aaCCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCgggg                                                          <  5:372243/149‑1 (MQ=255)                                                                                                 ggCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTgg                                                      >  2:77778/1‑149 (MQ=255)                                                                                                    cGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTc                                                    >  4:293544/1‑148 (MQ=255)                                                                                                      tCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAg                                                 <  1:46539/149‑1 (MQ=255)                                                                                                         aGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGccaccaacggccaggtcggatacaactcacgcaggtcggccactgccgccacccgtggcagtgttgcaggccaggaccatggcctttgcgccttgttcatggaa                                              >  1:276171‑M2/1‑45 (MQ=255)                                                                                                            cTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATc                                           <  6:69258/149‑1 (MQ=255)                                                                                                             tGCAGCCGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTCGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCATCCATGCTCGATCGCTACGCAAATGACGTACAGGTTAATACGCAGCCTTGCCCGGGGCTGCTCGAGCTGATc                                           >  4:244370/1‑148 (MQ=255)                                                                                                                   ttgaGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCg                                    <  5:106261/146‑1 (MQ=255)                                                                                                                      aGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCgggg                                                          <  4:133797/124‑1 (MQ=255)                                                                                                                      aGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCgggg                                                          >  3:133797/1‑124 (MQ=255)                                                                                                                       gCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGa                                <  3:174613/149‑1 (MQ=255)                                                                                                                          aCCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCt                             >  1:188168/1‑149 (MQ=255)                                                                                                                          aCCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCt                             >  6:204036/1‑149 (MQ=255)                                                                                                                                  gggCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCTGGTAAg                       <  2:181716/147‑1 (MQ=255)                                                                                                                                         gTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCTGGTAAGCCCGGCGGt              >  7:12379/1‑149 (MQ=255)                                                                                                                                            ggcgtgCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCTGGTAAGCCCGGCGGTgc            <  5:127543/145‑1 (MQ=255)                                                                                                                                            ggTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCTGGTAAGCCCGGCGGTgcg           >  4:139726/1‑149 (MQ=255)                                                                                                                                                     gccaccaacggccaggtcggatacaactcacgcaggtcggccactgccgccaccgtggcagtgttgcaggccaggaccatggcctttgcgccttgttcatggaagaacccggcaatgcgtcggcagcgctcgcggatatagtccggcga  >  8:265363‑M2/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AAAGGCCATGGTCCTGGCCTGCAACACTGCCACGGTGGCGGCAGTGGCCGACCTGCGTGAGTTGTATCCGACCTGGCCGTTGGTGGGCATGGAACCGGCCGTCAAGCCTGCAGCGGCAGCCACCCGCTCGGGCGTGGTCGGTGTGCTGGCCACCACCGGTACCCTGCAGAGTGCCAAGTTCGCAGCCTTGCTCGATCGCTTCGCAAATGACGTACAGGTTATTACCCAGCCTTGCCCGGGGCTGGTCGAGCTGATCGAAGCCGGTGACCTGGTAAGCCCGGCGGTGCGCCAGCTGCT  >  NC_002947/855353‑855649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.