| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1236861 = | 44 (0.750) | 7 (0.120) | 6/254 | NT | 14.3% | coding (371/471 nt) | ybaK | Cys‑tRNAPro deacylase |
| ? | NC_002947 | 1236892 = | 41 (0.720) | coding (402/471 nt) | ybaK | Cys‑tRNAPro deacylase | |||||
TTCGGCGACTTGACTTCAGAACCAGAGGGCCGCTTGGCGGCCCCCTGTTCTCAGCCTCGACCAATCCCGGCAAACGTGCCCTGCGTATACTCCGCCAGCACCGCTGCGGCCAACTCCACTTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1237011‑1236861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAAGTCAAGTCGCCGAACTGTATCGACGCACGCCATTCTCCTGG > NC_002947/1236892‑1237038 TTCGGCGACTTGACTTCAGAACCAGAGGGCCGCTTGGCGGCCCCCTGTTCTCAGCCTCGACCAATCCCGGCAAACGTGCCCTGCGTATACTCCGCCAGCACCGCTGCGGCCAACTCCACTTCCAGGCCA‑CGCCTGCCGGCGCTGACATG > 7:84872/1‑149 gTTCATAACCAGAGGTCCGCTTGGCGGCCCCCTGTTCTCAGCCTCGACCAATCCCGGCAAACGTGCCCTGCGTATACTCCGCCAGCACCGCTGCGGCCAACTCCACTTCCATGTCAGCGCCGGCAGGCG‑TGGCCTGGAAGTGGAGTTGG < 8:268534/148‑1 TCAGCCTCGACCAATCCCGGCAAACGTGCCCTGCGTATACTCCGCCAGCACCGCTGCGGCCAACTCCACTTCCAGGCCA‑CGCCTGCCGGCGCTGACAT < 1:218211/98‑1 TCAGCCTCGACCAATCCCGGCAAACGTGCCCTGCGTATACTCCGCCAGCACCGCTGCGGCCAACTCCACTTCCAGGCCA‑CGCCTGCCGGCGCTGACAT > 2:218211/1‑98 CACTTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAAGTCAAGTC > 1:307323/1‑149 TTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAA < 5:40330/138‑1 TTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAA > 6:40330/1‑138 TTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGG > 5:301696/1‑110 TTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGG < 6:301696/110‑1 A‑CGCCTGCCGGCGCTGACATGGAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAAGTCAAGTCGCCGAACTGTAT < 7:268534/149‑1 GAAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAAGTCAAGTCGCCGAACTGTATCGACGCACGCCATTCTCCTGG > 5:77473/1‑149 TTCGGCGACTTGACTTCAGAACCAGAGGGCCGCTTGGCGGCCCCCTGTTCTCAGCCTCGACCAATCCCGGCAAACGTGCCCTGCGTATACTCCGCCAGCACCGCTGCGGCCAACTCCACTTCCAGGCCA‑CGCCTGCCGGCGCTGACATGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1237011‑1236861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaAGTGGAGTTGGCCGCAGCGGTGCTGGCGGAGTATACGCAGGGCACGTTTGCCGGGATTGGTCGAGGCTGAGAACAGGGGGCCGCCAAGCGGCCCTCTGGTTCTGAAGTCAAGTCGCCGAACTGTATCGACGCACGCCATTCTCCTGG > NC_002947/1236892‑1237038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |