| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1266384 = | 50 (0.850) | 3 (0.050) | 3/250 | NT | 6.5% | coding (1604/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP |
| ? | NC_002947 | 1266425 = | 38 (0.680) | coding (1563/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP | |||||
CGACCAGGACCCACCCGCGGGCTGGATCGGCCATGCCAACCAGCGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1266533‑1266384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtcgTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCATAGCCGTCCCAG > NC_002947/1266425‑1266569 CGACCAGGACCCACCCGCGGGCTGGATCGGCCATGCCAACCAGCGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTC > 5:207802/1‑149CGACCAGGACCCACCCGCGGGCTGGATCGGCCATGCCAACCAGCGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTC < 6:207802/149‑1 CGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGG < 5:76060/124‑1 CGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGG > 6:76060/1‑124 GAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTG > 6:272676/1‑149 GTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCATAGCCGTCCCAG > 8:53000/1‑149 GTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTC > 1:328767/1‑106 GTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTC < 2:328767/106‑1 CGACCAGGACCCACCCGCGGGCTGGATCGGCCATGCCAACCAGCGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1266533‑1266384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtcgTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCATAGCCGTCCCAG > NC_002947/1266425‑1266569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |