New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1604908 =51 (0.870)4 (0.070) 4/244 NT 8.2% coding (1343/1707 nt) PP_1407 sulfate transporter
?NC_002947 1604959 = 42 (0.770)coding (1292/1707 nt) PP_1407 sulfate transporter

CCCGGCATCGTGTTTGCCGTGACCCTGGCGATCCTGCGCCTGCTTTACAGCATCTACCAACCCACCGATGCCGTACTGGGCTGGCTGCCGGGCACCGAAGGCCAGGTGGACATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1605056‑1604908
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctggcctTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGGGCAGCACGCCCAGGCTCAGTACGCCCGCCGTGGTCAGCAGGCACAGCCA  >  NC_002947/1604959‑1605104
                                                                                                                                                                                                                                                                                                       
CCCGGCATCGTGTTTGCCGTGACCCTGGCGATCCTGCGCCTGCTTTACAGCATCTACCAACCCACCGATGCCGTACTGGGCTGGCTGCCGGGCACCGAAGGCCAGGTGGACATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGC                                                                                                                                                      <  3:154507/147‑1
   GGCATCGTGTTTGCCGTGACCCTGGCGATCCTGCGCCTGCTTTACAGCATCTACCAACCCACCGATGCCGTACTGGGCTGGCTGCCGGGCACCGAAGGCCAGGTGGACATCCGCAAGTTCAAAGACGCCCGCACCGTAC                                                                                                                                                           <  7:186953/139‑1
   GGCATCGTGTTTGCCGTGACCCTGGCGATCCTGCGCCTGCTTTACAGCATCTACCAACCCACCGATGCCGTACTGGGCTGGCTGCCGGGCACCGAAGGCCAGGTGGACATCCGCAAGTTCAAAGACGCCCGCACCGTAC                                                                                                                                                           >  8:186953/1‑139
                                                                                                 AAGGCCAGGTGGACATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGCCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGG                                                   >  1:369914/1‑149
                                                                                                           GGACATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGCCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGC                                                                                     <  7:291321/105‑1
                                                                                                           GGACATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGCCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGC                                                                                     >  8:291321/1‑105
                                                                                                               ATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGCCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGGGCAGCACGCCCAGG                                     <  2:369914/149‑1
                                                                                                                                            ACCTGGCCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGGGCAGCACGCCCAGGCTCAGTACGCCCGCCGTGGTCAGCAGGCA        >  7:177221/1‑149
                                                                                                                                              CTGGCCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGGGCAGCACGCCCAGGCTCAGTACGCCCGCCGTGGTCAGCAGGCACA      <  8:177221/149‑1
                                                                                                                                                  CCTTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGGGCAGCACGCCCAGGCTCAGTACGCCCGCCGTGGTCAGCAGGCACAGCCA  <  4:154507/149‑1
                                                                                                                                                    TTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCA                                                                     <  3:243070/80‑1
                                                                                                                                                                                                                                                                                                       
CCCGGCATCGTGTTTGCCGTGACCCTGGCGATCCTGCGCCTGCTTTACAGCATCTACCAACCCACCGATGCCGTACTGGGCTGGCTGCCGGGCACCGAAGGCCAGGTGGACATCCGCAAGTTCAAAGACGCCCGCACCGTACCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1605056‑1604908
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctggcctTCGGTGCCCGGCAGCCAGCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCCGGGCAGCACGCCCAGGCTCAGTACGCCCGCCGTGGTCAGCAGGCACAGCCA  >  NC_002947/1604959‑1605104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.