New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1604908 = | 51 (0.870) | 4 (0.070) | 4/244 | NT | 8.2% | coding (1343/1707 nt) | PP_1407 | sulfate transporter |
? | NC_002947 | 1604959 = | 42 (0.770) | coding (1292/1707 nt) | PP_1407 | sulfate transporter |
TGCCGCTGACATCAATGCTGGTTACCGCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCC > NC_002947/1604762‑1605053 | tggctgtgcctgctgaccacggcgggcgtactgagcctgggcgtgctgcccggcatcgtgtttgccgtgaccctggcgatcctgcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAgg < 4:154507‑M1/3‑1 (MQ=255) cGCTGACATCAATGCTGGTTACCGCTTCGGCATCGAATAGCACGGCTTTAGGGTGGTCCTGGCTTTGCACGGCTTCTTGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACTGGATGGCGTCGTCGAAGCGGTACACCAccaggcca < 7:307355/149‑1 (MQ=255) tgtgcctgctgaccacggcgggcgtactgagcctgggcgtgctgcccggcatcgtgtttgccgtgaccctggcgatcctgcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAGGCCAg < 8:177221‑M1/7‑1 (MQ=255) tgcctgctgaccacggcgggcgtactgagcctgggcgtgctgcccggcatcgtgtttgccgtgaccctggcgatcctgcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAGGCCAGGt > 7:177221‑M1/141‑149 (MQ=255) aTCAATGCTGGTTACCGCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACgg > 8:256524/1‑149 (MQ=255) aTCAATGCTGGTTACCGCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACgg > 6:298456/1‑149 (MQ=255) gTTACCGCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGt < 6:149393/148‑1 (MQ=255) ccGCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCttt < 3:12864/148‑1 (MQ=255) gCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGaa < 5:147170/149‑1 (MQ=255) gCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCg > 5:170829/1‑149 (MQ=255) aTCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGCCCAGGAACGGTGCGGGCGTGGATGACCTTGCGGa > 8:215305/1‑149 (MQ=255) cctgggcgtgctgcccggcatcgtgtttgccgtgaccctggcgatcctgcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGAt < 2:369914‑M1/38‑1 (MQ=255) gAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAACCGGTACACCACCAGCCCAGGTACGCTGCGGGCGTCTTTGAAAttcgcctg > 5:279910/1‑141 (MQ=255) cGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTgg > 8:181381/1‑149 (MQ=255) ggCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGc < 8:338295/149‑1 (MQ=255) tttAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACg < 6:254448/109‑1 (MQ=255) tttAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACg > 5:254448/1‑109 (MQ=255) ccggcatcgtgtttgccgtgaccctggcgatcctgcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCtt > 1:369914‑M1/98‑149 (MQ=255) aGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCg < 7:36145/148‑1 (MQ=255) aGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCg < 5:298456/148‑1 (MQ=255) gCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGc > 1:339135/1‑141 (MQ=255) gCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGc < 2:339135/141‑1 (MQ=255) tCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCgg < 8:273433/149‑1 (MQ=255) tCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCgg > 5:331315/1‑149 (MQ=255) tgaccctggcgatcctgcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaa < 3:243070‑M1/1‑1 (MQ=255) aCGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGa > 4:8484/1‑103 (MQ=255) aCGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGa < 3:8484/103‑1 (MQ=255) cGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAg > 7:243411/1‑148 (MQ=255) gCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCAt < 6:170829/147‑1 (MQ=255) gcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTcc > 8:291321‑M1/64‑105 (MQ=255) gcgcctgctttacagcatctaccaacccaccgatgccgtactgggctggctgccgggcaccgaAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTcc < 7:291321‑M1/42‑1 (MQ=255) ggCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTg < 7:256524/149‑1 (MQ=255) gcgcATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTgg > 2:285773/1‑149 (MQ=255) gcATCTTGAAGTAGTCGGCATTGAAGAAGAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGt < 7:215305/149‑1 (MQ=255) gcATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGt > 4:71358/1‑149 (MQ=255) cATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGtt < 6:331315/149‑1 (MQ=255) gAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGt < 7:181381/146‑1 (MQ=255) agtagtCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCg > 6:57542/1‑104 (MQ=255) agtagtCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCg < 5:57542/104‑1 (MQ=255) gtCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCg > 8:20298/1‑107 (MQ=255) ggCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTaaa < 3:71358/149‑1 (MQ=255) aTTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTATGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGt < 4:184847/126‑1 (MQ=255) ttGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAg < 7:4413/149‑1 (MQ=255) agaaCAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGgcgc < 8:243411/149‑1 (MQ=255) gaaCAGGATGGCGTCGTCGAAGCGGTACACGACCAGGCCAGGTTCGGTGCGGGCGTCTTTGAAATTGCGGATGTCAACATGGCCTTCGGTGCCCGGAAGCCAG‑CCGAGTACGGCATCGGTGGGTTGGTAGATGCTGTAATGCAGgcg > 6:292045/1‑147 (MQ=255) cAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCCGCCAG‑CCCAGTACGGGCTCGGTGGGTGGGTAGATGCTGTAAAGCAGgcgccg > 8:124552/1‑145 (MQ=255) cAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGa > 4:111815/1‑128 (MQ=255) cAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGa < 3:111815/128‑1 (MQ=255) gtcgtcGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCTGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAggg > 8:2966/1‑149 (MQ=255) gtcgtcGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAC‑CCCAGTACGGCATGGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAggg > 5:242743/1‑149 (MQ=255) tcgtcgAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAGCCCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAggg < 1:285773/149‑1 (MQ=255) tcgtcgAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGt > 3:182292/1‑149 (MQ=255) tcgAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCAc > 5:283274/1‑149 (MQ=255) cgAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCa < 5:371634/98‑1 (MQ=255) cgAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCa > 6:371634/1‑98 (MQ=255) aaGCGGTACACCACCAGGCCAGGTACGGTGCTGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGc < 3:22685/149‑1 (MQ=255) cGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCTGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCaaa < 7:2966/149‑1 (MQ=255) gTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAaca > 6:137445/1‑149 (MQ=255) accaccAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGAt > 2:278565/1‑149 (MQ=255) caccaGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGc < 5:137445/149‑1 (MQ=255) accaGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGcc > 2:118303/1‑149 (MQ=255) | TGCCGCTGACATCAATGCTGGTTACCGCTTCGGCATCGAATAGCACGGCTTTAGGCTGGTCCTGGCTTTGCACGGCTTCTAGCAGGCGCATCTTGAAGTAGTCGGCATTGAAGAACAGGATGGCGTCGTCGAAGCGGTACACCACCAGGCCAGGTACGGTGCGGGCGTCTTTGAACTTGCGGATGTCCACCTGGCCTTCGGTGCCCGGCAGCCAG‑CCCAGTACGGCATCGGTGGGTTGGTAGATGCTGTAAAGCAGGCGCAGGATCGCCAGGGTCACGGCAAACACGATGCC > NC_002947/1604762‑1605053 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |