| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2087031 | NA (NA) | 3 (0.050) | 3/254 | NT | NA | coding (1146/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | = 2087061 | NA (NA) | coding (1176/1302 nt) | PP_1865 | transposase | |||||
AACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086880‑2087031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCC < NC_002947/2087061‑2086914 AACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGC > 3:117568/1‑149AACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGC > 3:287892/1‑149AACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGC > 3:364049/1‑149 ACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCC > 5:309632/1‑149 ACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCAGATGGAAAACCTGGCTCAGCGCC > 6:31979/1‑149 ACAGGCTCACCGCGATGCCATGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCAAGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCC < 7:237901/149‑1 AGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTG < 4:287892/149‑1 AGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTG < 2:152413/149‑1 AGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGG < 1:199727/149‑1 CTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAG < 5:358401/145‑1 CTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAG > 6:358401/1‑145 CCTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCT > 3:242576/1‑149 CCTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCC < 3:449/115‑1 CCTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCC > 4:449/1‑115 CTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTT > 6:65713/1‑149 CTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATATGCATGCATTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTT > 5:3398/1‑149 CTGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATATGCATGCATTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTT < 6:3398/149‑1 TGTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTC > 4:18348/1‑149 GTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCC > 3:274702/1‑149 AACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086880‑2087031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgTCTGGGCTGGATGTTTCTGGCCAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCC < NC_002947/2087061‑2086914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |