New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2430851 =	52 (0.880)	3 (0.050)	3/250	NT	5.8%	coding (1106/1974 nt)	PP_2130	lytic transglycosylase
	?	NC_002947	2430901 =	47 (0.840)					coding (1056/1974 nt)	PP_2130	lytic transglycosylase

CGCGACAACACCGTCAGCGAATGGCGCCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCAGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2430999‑2430851 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcCAGGTCCTGGGGAA‑GGCGCTTGGTCAACTCGTAGGCGTCCTCCCAGCGGCCCAGGCGCAGCAGCAGGCGAAGGCGCCATTCGCTGACGGTGTTGTCGCGCAGCTGGGGGTCATAGCGGGTCATCAGGTCGAGCGCGCGTGGGTCGTAG  >  NC_002947/2430901‑2431048                                                                                                                                                                                                                                                                                                            CGCGACAACACCGTCAGCGAATGGCGCCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCTGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGG                                                                                                                                                        <  7:317977/148‑1                        GCGCCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCAGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAG                                                                                                                                                            >  1:57550/1‑121                        GCGCCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCAGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAG                                                                                                                                                            <  2:57550/121‑1                           CCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCAGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGC                                                                                                                                                       >  5:107632/1‑123                           CCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCAGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGC                                                                                                                                                       <  6:107632/123‑1                                                                                                   GGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGCCAGGTCCTGGGGAA‑GGCGCTTGGTCAACTCGTAGGCGTCCTCCCAGCGGCCCAGGCGCAGCAGCAGGCGAAGGCGCCATTCGCTGACGGTGTTGTCGC                                                    >  1:58043/1‑149                                                                                                    GCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGCCAGGTCCTGGGGAA‑GGCGCTTGGTCAACTCGTAGGCGTCCTCCCAGCGGCCCAGGCGCAGCAGCAGGCGAAGGCGCCATTCGCTGACGGTGTTGTCGC                                                    <  2:58043/148‑1                                                                                                      CAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGCCAGGTCCTGGGGAA‑GGCGCTTGGTCAACTCGTAGGCGTCCTCCCAGCGGCCCAGGCGCAG                                                                                          <  4:44027/108‑1                                                                                                                                                  TGGCCAGGTCCTGGGGAAGGGCGCTTGGTGAACTCGTAGGCGTGCTCCCAGCGGCCCAGGCGCAGCAGCAGGCGAAGGCGCCATTCGCTGACGGTGTTGTCGCGCGGCTGGGGGTCATAGCGGGTCGTCAGGGCGCGCGCGCGTGGGTC      >  4:312676/1‑149                                                                                                                                                     CCAGGTCCTGGGGAA‑GGCGCTTGGTCAACTCGTAGGCGTCCTCCCAGCGGCCCAGGCGCAGCAGCAGGCGAAGGCGCCATTCGCTGACGGTGTTGTCGCGCAGCTGGGGGTCATAGCGGGTCATCAGGTCGAGCGCGCGTGGGTCGTAG  >  2:223372/1‑149                                                                                                                                                                                                                                                                                                            CGCGACAACACCGTCAGCGAATGGCGCCTTCGCCTGCTGCTGCGCCTGGGCCGCTGGGAGGACGCCTACGAGTTGACCAAGCGCCTTCCCCAGGACCTGGCCAGCACCAGCCGCTGGAAGTACTGGCAGGCTCGCAGCCTGGAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2430999‑2430851 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcCAGGTCCTGGGGAA‑GGCGCTTGGTCAACTCGTAGGCGTCCTCCCAGCGGCCCAGGCGCAGCAGCAGGCGAAGGCGCCATTCGCTGACGGTGTTGTCGCGCAGCTGGGGGTCATAGCGGGTCATCAGGTCGAGCGCGCGTGGGTCGTAG  >  NC_002947/2430901‑2431048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.