| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2468032 = | 51 (0.870) | 3 (0.050) | 3/252 | NT | 5.7% | coding (205/264 nt) | PP_2161 | hypothetical protein |
| ? | NC_002947 | 2468079 = | 50 (0.880) | coding (158/264 nt) | PP_2161 | hypothetical protein | |||||
CGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAGATCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2468182‑2468032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccAGGTTGTTGTCTGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTC > NC_002947/2468079‑2468224 CGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAGATCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCA > 2:318260/1‑149CGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAGATCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCA < 5:166070/149‑1CGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAGATCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCA > 6:166310/1‑149 CCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCACCAGGTTGTTGTCTGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCC < 5:315998/137‑1 CCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCACCAGGTTGTTGTCTGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCC > 6:315998/1‑137 CTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCACCAGGTTGTTGTCTGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGT > 6:247716/1‑149 ACCAGGTTGTTGTCTGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGCACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTC > 3:251806/1‑149 CGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAGATCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGAACCTGGCAATCGAGCGCTTCGAGGCCGACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2468182‑2468032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccAGGTTGTTGTCTGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTC > NC_002947/2468079‑2468224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |