New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2507110 = | 48 (0.820) | 3 (0.060) | 3/242 | NT | 6.5% | intergenic (+8/+65) | PP_2200/PP_2201 | hypothetical protein/alpha/beta family hydrolase |
? | NC_002947 | 2507160 = | 42 (0.770) | intergenic (+58/+15) | PP_2200/PP_2201 | hypothetical protein/alpha/beta family hydrolase |
TGATCACGTTCGAAGGCATGGGGCACGCGCCGCAAATCGAGGAACCGGTGCGGTTCAATCGCACCCTGGTCGAATGGCTGGGCAAGTGAGCCAATGATCGGCCTCTGTGGCAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2507263‑2507110 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccacagAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGCCCC > NC_002947/2507160‑2507301 TGATCACGTTCGAAGGCATGGGGCACGCGCCGCAAATCGAGGAACCGGTGCGGTTCAATCGCACCCTGGTCGAATGGCTGGGCAAGTGAGCCAATGATCGGCCTCTGTGGCAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGC > 6:225248/1‑149 GATCACGTTCGAAGGCATGGGGCACGCGCCGCAAATCGAGGAACCGGTGCGGTTCAATCGCACCCTGGTCGAATGGCTGGGCAAGTGAGCCAATGATCGGCCTCTGTGGCAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGC > 7:63874/1‑148 TCTGTGGCAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACG > 4:52852/1‑149 TGTGGCAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGT > 2:115639/1‑148 CAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAG < 3:52852/149‑1 CCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGCCCC < 5:76734/148‑1 AGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGG < 3:355935/130‑1 AGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGG > 4:355935/1‑130 TGATCACGTTCGAAGGCATGGGGCACGCGCCGCAAATCGAGGAACCGGTGCGGTTCAATCGCACCCTGGTCGAATGGCTGGGCAAGTGAGCCAATGATCGGCCTCTGTGGCAGCGTACGCTTTTGTACTCTGCACAAGACCGCTGCTGCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2507263‑2507110 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccacagAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGCCCC > NC_002947/2507160‑2507301 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |