New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2507110 =	48 (0.820)	3 (0.060)	3/242	NT	6.5%	intergenic (+8/+65)	PP_2200/PP_2201	hypothetical protein/alpha/beta family hydrolase
	?	NC_002947	2507160 =	42 (0.770)					intergenic (+58/+15)	PP_2200/PP_2201	hypothetical protein/alpha/beta family hydrolase

GGATGAGTTTTTCTGCGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGCCCCAGCTCTG  >  NC_002947/2507012‑2507308                                                                                                                                                     |                                                                                                                                                     cgttcgaaggcatggggcacgcgccgcaaatcgaggaaccggtgcggttcaatcgcaccctggtcgaatggctgggcaagtgagccaatgatcggcctCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACaga                                                                                                                                                      >  4:52852‑M1/99‑149 (MQ=255)  gATGAGTTTTTCTGCGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACagag                                                                                                                                                     >  2:354547/1‑149 (MQ=255)    tGAGTTTTTCTGCGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGc                                                                                                                                                   <  5:19756/149‑1 (MQ=255)    tGAGTTTTTCTGCGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGCTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACagagcc                                                                                                                                                   >  1:181734/1‑147 (MQ=255)              tGCGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTgg                                                                                                                                         >  7:210603/1‑149 (MQ=255)                cGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTgg                                                                                                                                         <  5:269318/147‑1 (MQ=255)                     aaGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGcc                                                                                                                                                  >  1:157468/1‑133 (MQ=255)                     aaGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGcc                                                                                                                                                  <  2:157468/133‑1 (MQ=255)                         ggCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCAtt                                                                                                                                           >  5:83030/1‑136 (MQ=255)                         ggCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCAtt                                                                                                                                           <  6:83030/136‑1 (MQ=255)                         ggCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGcc                                                                                                                               <  7:26997/148‑1 (MQ=255)                          gCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGcc                                                                                                                               >  7:330148/1‑147 (MQ=255)                            cGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGc                                                                                                                           >  1:125545/1‑149 (MQ=255)                                     ggcgggcgACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGAc                                                                                                                   >  8:281581/1‑148 (MQ=255)                                                 tGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGAtt                                                                                                       <  1:354547/148‑1 (MQ=255)                                                    cGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAAc                                                                                                   >  4:25948/1‑149 (MQ=255)                                                    cGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAAc                                                                                                   <  8:210603/149‑1 (MQ=255)                                                     gAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAAcc                                                                                                  >  3:216029/1‑149 (MQ=255)                                                                 aCAGAAGAGCAGGTCTGTAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTTCAGAGGACAAAAGCGTACGCTGCCACAGAGGCCGATCATAGGCTCACTTGCCCTGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCt                                                                                      <  4:235019/149‑1 (MQ=255)                                                                  cAGAAGAGCAGGGCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTc                                                                                     <  6:64267/149‑1 (MQ=255)                                                                      agagCAGGTCTGGAAAGTGTAATGGCACCCTGTGGAAGGAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGAtt                                                                                 <  2:181734/149‑1 (MQ=255)                                                                             gTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTgcggcg                                                                          >  6:152767/1‑149 (MQ=255)                                                                                tGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGt                                                                       >  6:76734/1‑149 (MQ=255)                                                                                  gAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCg                                                                                    <  8:349214/134‑1 (MQ=255)                                                                                  gAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCg                                                                                    >  7:349214/1‑134 (MQ=255)                                                                                     aGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGcccc                                                                  <  3:172791/149‑1 (MQ=255)                                                                                         tAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGc                                                              >  7:169739/1‑149 (MQ=255)                                                                                           aTGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCt                                                            >  5:10379/1‑149 (MQ=255)                                                                                              gCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCg                                                         <  6:10379/149‑1 (MQ=255)                                                                                                aCCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTgcgg                                                                            <  6:181707/128‑1 (MQ=255)                                                                                                aCCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTgcgg                                                                            <  6:186983/128‑1 (MQ=255)                                                                                                 cccTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAAc                                                      <  7:281581/149‑1 (MQ=255)                                                                                                 cccTGTGGCAGCAGCGGGCTTTTGCAGAGTACAAAAGCGTAAGCTTCCACAGAGGCCGTTCTTTGGCTCACTTGCCCATCCATTTGACCATGGTGCGATTGATCCGCATCGGTTCCTCGATTTGCGGCGCGTGCCAATTGCCTTCTAAc                                                      <  4:88695/149‑1 (MQ=255)                                                                                                  tctgtggcagcgtacgcttttgtactctgcacaagaccgctgctgccacagAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACg                                                     >  4:52852‑M2/52‑149 (MQ=255)                                                                                                    tgtggcagcgtacgcttttgtactctgcacaagaccgctgctgccacagAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGt                                                    >  2:115639‑M2/50‑148 (MQ=255)                                                                                                        GCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATc                                                >  7:63874‑M1/1‑148 (MQ=255)                                                                                                        GCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCa                                               >  6:225248‑M1/1‑149 (MQ=255)                                                                                                         cagcgtacgcttttgtactctgcacaagaccgctgctgccacagAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAg                                              <  3:52852‑M2/105‑1 (MQ=255)                                                                                                               cGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCAcc                                        <  8:169739/149‑1 (MQ=255)                                                                                                                ggTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCt                                       <  4:216029/149‑1 (MQ=255)                                                                                                                  tCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCttt                                     >  6:201098/1‑149 (MQ=255)                                                                                                                      gtgCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTgg                                   <  3:25948/147‑1 (MQ=255)                                                                                                                      gtgCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTgg                                   <  5:201098/147‑1 (MQ=255)                                                                                                                         cAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATc                              <  5:152767/149‑1 (MQ=255)                                                                                                                            agTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATg                                                               >  7:304842/1‑113 (MQ=255)                                                                                                                            agTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATg                                                               <  8:304842/113‑1 (MQ=255)                                                                                                                             gTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGcc                          <  2:125545/149‑1 (MQ=255)                                                                                                                                cAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCt                         <  8:330148/147‑1 (MQ=255)                                                                                                                                 aaaaGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGc                      >  7:248740/1‑149 (MQ=255)                                                                                                                                 aaaaGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGc                      >  6:298100/1‑149 (MQ=255)                                                                                                                                 aaaaGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGc                      >  6:121596/1‑149 (MQ=255)                                                                                                                                   aaGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGa                                                                                   <  8:58290/86‑1 (MQ=255)                                                                                                                                   aaGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGa                                                                                   >  7:58290/1‑86 (MQ=255)                                                                                                                                               ccacagAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGcccc         <  5:76734‑M2/142‑1 (MQ=255)                                                                                                                                                   agAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTgg                       <  3:355935‑M2/128‑1 (MQ=255)                                                                                                                                                   agAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTgg                       >  4:355935‑M2/3‑130 (MQ=255)                                                                                                                                                     agGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGCCCCAGCTCTg  >  6:37591/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GGATGAGTTTTTCTGCGAGGAAGAGGCCGAGTTGCGGGCGGGCGACTTTGCCGAGCTGGGCTGGACAGAAGAGCAGGTCTGGAAAGTGTAATGGCACCCTGTGGCAGCAGCGGTCTTGTGCAGAGTACAAAAGCGTACGCTGCCACAGAGGCCGATCATTGGCTCACTTGCCCAGCCATTCGACCAGGGTGCGATTGAACCGCACCGGTTCCTCGATTTGCGGCGCGTGCCCCATGCCTTCGAACGTGATCAGCTCACCTTTGGGTATCAGCCTGGCCACCTGCGGCCCCAGCTCTG  >  NC_002947/2507012‑2507308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.