| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2535887 | 56 (0.950) | 3 (0.050) | 3/248 | NT | 6.5% | coding (237/345 nt) | mrpC | K(+)/H(+) antiporter subunit C |
| ? | NC_002947 | = 2535942 | 33 (0.590) | coding (182/345 nt) | mrpC | K(+)/H(+) antiporter subunit C | |||||
TCAGCGGCAGCAGGATGGGGGCGACAATCAGTTGACTCAGATCACTCATTCGTCACGCTCCCGGCCATCCACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2535734‑2535887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggcgTTACCCAGGACCTGCTGCATTACACCGACCCGCTGCCACAGGCACTGGTGCTCACCGCCATCGTCATCAGTTTCGCCATGACCGCGCTGTTCCTGGTGGTGCTGCTGGCCTCGCGCGGCCTGACCGGTACCGACCACGTGGATGG < NC_002947/2535942‑2535798 TCAGCGGCAGCAGGATGGGGGCGACAATCAGTTGACTCAGATCACTCATTCGTCACGCTCCCGGCCATCCACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGA > 5:163469/1‑149 AATCAGTTGACTCAGATCACTCATTCGTCACGCTCCCGGCCATCCACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATG < 7:98945/126‑1 AATCAGTTGACTCAGATCACTCATTCGTCACGCTCCCGGCCATCCACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATG > 8:98945/1‑126 TCCACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATGGCGTTACCCAGGACCTGCTGCATTACACCGACCCGCTGCCACAGGCACTGGTGCTCACCGCCATC < 7:73943/149‑1 CACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATGGCGTTACCCAGGACCTGCTGCATTACACCGACCCGCTGCCACAGGCACTGGTGCTCACCGCCATCG < 6:163469/148‑1 GTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATGGCGTTACCCAGTACCTGCTGCATTACACCGACCCGCTGACACAGGCACTGGTGCTCACCGCCATCGTCAT < 1:219864/149‑1 ATGGCGTTACCCAGGACCTGCTGCATTACACCGACCCGCTGCCACAGGCACTGGTGCTCACCGCCATCGTCATCAGTTTCGCCATGACCGCGCTGTTCCTGGTGGTGCTGCTGGCCTCGCGCGGCCTGACCGGTACCGACCACGTGGAT > 5:281612/1‑149 GGCGTTACCCAGGACCTGCTGCATTACACCGACCCGCTGCCACAGGCACTGGTGCTCACCGCCATCGTCATCAGTTTCGCCATGACCGCGCTGTTCCTGGTGGTGCTGCTGGCCTCGCGCGGCCTGACCGGTACCGACCACGTGGATGG > 5:20553/1‑149 TCAGCGGCAGCAGGATGGGGGCGACAATCAGTTGACTCAGATCACTCATTCGTCACGCTCCCGGCCATCCACGTGGTCGGTACCGGTCAGGCCGCGCGAGGCCAGCAGCACCACCAGGAACAGCGCGGTCATGGCGAAACTGATGACGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2535734‑2535887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggcgTTACCCAGGACCTGCTGCATTACACCGACCCGCTGCCACAGGCACTGGTGCTCACCGCCATCGTCATCAGTTTCGCCATGACCGCGCTGTTCCTGGTGGTGCTGCTGGCCTCGCGCGGCCTGACCGGTACCGACCACGTGGATGG < NC_002947/2535942‑2535798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |