New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2912399 = | 47 (0.800) | 3 (0.050) | 3/244 | NT | 6.3% | coding (1419/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
? | NC_002947 | 2912449 = | 45 (0.820) | coding (1469/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
GAGGAACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2912552‑2912399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCT > NC_002947/2912449‑2912574 GAGGAACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGA > 8:81839/1‑149 AGGAACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGAT > 5:355560/1‑149 GAACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGG < 2:8939/149‑1 ACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCG > 4:324362/1‑149 ACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGACGTCGGCAGGCGTGGTGGGGATGGCG < 3:111873/149‑1 CATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTC > 7:216433/1‑148 TCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTC < 8:216433/149‑1 ACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCC > 2:350780/1‑148 GGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCT > 3:194644/1‑135 GGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCT < 4:194644/135‑1 GAGGAACTCGTCAATCTGCGGCTGGATGGTGCGGGCGAACTCTTCGAACACCAGGTGCTGGTACTGCATCTCGGTGCCGAACTTGGCGGCCTGGAACAGCCGCTCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2912552‑2912399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCT > NC_002947/2912449‑2912574 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |