New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2912399 =47 (0.800)3 (0.050) 3/244 NT 6.3% coding (1419/10827 nt) PP_2561 hemolysin‑type calcium‑binding bacteriocin
?NC_002947 2912449 = 45 (0.820)coding (1469/10827 nt) PP_2561 hemolysin‑type calcium‑binding bacteriocin

ACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATCAA  >  NC_002947/2912302‑2912581
                                                                                                                                                   |                                                                                                                                    
aCTCCGCTCACAACCGCCTGGTGCAGCCGACCACGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCACTGCGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAg                                                                                                                                     <  8:314377/149‑1 (MQ=255)
 cTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGc                                                                                                                                    >  2:366295/1‑149 (MQ=255)
  tCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCg                                                                                                                                   >  8:166106/1‑149 (MQ=255)
    cGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGCCATCGACGCGCTGGTGTGGGATGGCGAGCGGc                                                                                                                                 >  8:295568/1‑149 (MQ=255)
    cGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGc                                                                                                                                 >  7:77008/1‑149 (MQ=255)
      aGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTg                                                                                                                               >  5:150845/1‑149 (MQ=255)
            aCCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAg                                                                                                                         >  3:265150/1‑149 (MQ=255)
               gCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGgcc                                                                                                                      <  7:166106/149‑1 (MQ=255)
                           agACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGc                                                                                                          <  8:286665/149‑1 (MQ=255)
                            gACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCa                                                                                                         <  7:29479/149‑1 (MQ=255)
                               cAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCAcc                                                                                                       >  2:43771/1‑148 (MQ=255)
                                aaGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCAcc                                                                                                       >  6:355560/1‑147 (MQ=255)
                                  ggACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCgaga                                                                                                   <  1:366295/149‑1 (MQ=255)
                                       cccTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAg                                                                                              <  8:77008/149‑1 (MQ=255)
                                        ccTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAg                                                                                              >  4:342034/1‑148 (MQ=255)
                                                   cgGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTg                                                                                  <  7:64459/149‑1 (MQ=255)
                                                        gACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGtt                                                                             <  5:44381/149‑1 (MQ=255)
                                                         aCCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTc                                                                            <  1:43771/149‑1 (MQ=255)
                                                              gCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGaa                                                                         <  6:150845/147‑1 (MQ=255)
                                                              gCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAaga                                                                       <  4:337373/149‑1 (MQ=255)
                                                                gTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGt                                                                     >  6:298095/1‑149 (MQ=255)
                                                                  tCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTc                                                                   >  3:146643/1‑149 (MQ=255)
                                                                   ccTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTc                                                                   <  2:289005/148‑1 (MQ=255)
                                                                     tCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGaa                                                                         >  3:322099/1‑140 (MQ=255)
                                                                     tCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGaa                                                                         <  4:322099/140‑1 (MQ=255)
                                                                       aaTGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCg                                                              >  7:351425/1‑149 (MQ=255)
                                                                         tGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCa                                                            <  5:298095/149‑1 (MQ=255)
                                                                            gTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCTGTACCAGCACCTGGTGTTCGAAGAGTTc                                                                   <  1:205535/139‑1 (MQ=255)
                                                                            gTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTc                                                                   >  2:205535/1‑139 (MQ=255)
                                                                             tGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCAt                                                        >  4:101450/1‑149 (MQ=255)
                                                                                 tGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAg                                                    >  1:83261/1‑149 (MQ=255)
                                                                                 tGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAg                                                    >  3:324362/1‑149 (MQ=255)
                                                                                    tCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCg                                                 <  2:83261/149‑1 (MQ=255)
                                                                                      gacgacGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCg                                                 >  5:233688/1‑147 (MQ=255)
                                                                                       acgacgTAACCGCCATCCCCACCACGCCTGCCAACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCg                                                 >  6:345052/1‑146 (MQ=255)
                                                                                            gTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGa                                         >  5:173874/1‑149 (MQ=255)
                                                                                             tAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCa                                                            >  5:275320/1‑129 (MQ=255)
                                                                                             tAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCa                                                            <  6:275320/129‑1 (MQ=255)
                                                                                               aCCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGa                                      <  3:254805/149‑1 (MQ=255)
                                                                                               aCCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGa                                      <  4:146643/149‑1 (MQ=255)
                                                                                                 CGCCATCCCCACCACGCCTGCCGACGTCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGt                                    <  3:111873‑M1/149‑1 (MQ=255)
                                                                                                 CGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGt                                    >  4:324362‑M1/1‑149 (MQ=255)
                                                                                                   CCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTc                                  <  2:8939‑M1/149‑1 (MQ=255)
                                                                                                    catcccacaccagcgcggcgatgtcggcaggcgtggtggggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTc                                  >  7:216433‑M2/48‑148 (MQ=255)
                                                                                                     ATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCt                                >  5:355560‑M1/1‑149 (MQ=255)
                                                                                                      tcccacaccagcgcggcgatgtcggcaggcgtggtggggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTc                               <  8:216433‑M2/104‑1 (MQ=255)
                                                                                                      TCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTc                               >  8:81839‑M1/1‑149 (MQ=255)
                                                                                                           accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTg                                                                                  <  6:231265/93‑1 (MQ=255)
                                                                                                           accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTg                                                                                  >  5:231265/1‑93 (MQ=255)
                                                                                                           accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGc                                                   >  2:130242/1‑124 (MQ=255)
                                                                                                           accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGc                                                   <  1:130242/124‑1 (MQ=255)
                                                                                                            accagcgcggcgatgtcggcaggcgtggtggggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGcccc                          >  2:350780‑M2/40‑148 (MQ=255)
                                                                                                                          aTCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGacac           >  8:330313/1‑149 (MQ=255)
                                                                                                                                gcgcTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGAt     <  4:265150/149‑1 (MQ=255)
                                                                                                                                 cgcTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATc    <  3:342034/149‑1 (MQ=255)
                                                                                                                                   cTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATCaa  <  5:345052/149‑1 (MQ=255)
                                                                                                                                          gggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCt         >  3:194644‑M2/10‑135 (MQ=255)
                                                                                                                                          gggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCt         <  4:194644‑M2/126‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                    
ACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATCAA  >  NC_002947/2912302‑2912581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.