New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2912399 = | 47 (0.800) | 3 (0.050) | 3/244 | NT | 6.3% | coding (1419/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
? | NC_002947 | 2912449 = | 45 (0.820) | coding (1469/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
ACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATCAA > NC_002947/2912302‑2912581 | aCTCCGCTCACAACCGCCTGGTGCAGCCGACCACGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCACTGCGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAg < 8:314377/149‑1 (MQ=255) cTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGc > 2:366295/1‑149 (MQ=255) tCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCg > 8:166106/1‑149 (MQ=255) cGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGCCATCGACGCGCTGGTGTGGGATGGCGAGCGGc > 8:295568/1‑149 (MQ=255) cGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGc > 7:77008/1‑149 (MQ=255) aGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTg > 5:150845/1‑149 (MQ=255) aCCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAg > 3:265150/1‑149 (MQ=255) gCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGgcc < 7:166106/149‑1 (MQ=255) agACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGc < 8:286665/149‑1 (MQ=255) gACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCa < 7:29479/149‑1 (MQ=255) cAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCAcc > 2:43771/1‑148 (MQ=255) aaGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCAcc > 6:355560/1‑147 (MQ=255) ggACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCgaga < 1:366295/149‑1 (MQ=255) cccTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAg < 8:77008/149‑1 (MQ=255) ccTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAg > 4:342034/1‑148 (MQ=255) cgGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTg < 7:64459/149‑1 (MQ=255) gACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGtt < 5:44381/149‑1 (MQ=255) aCCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTc < 1:43771/149‑1 (MQ=255) gCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGaa < 6:150845/147‑1 (MQ=255) gCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAaga < 4:337373/149‑1 (MQ=255) gTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGt > 6:298095/1‑149 (MQ=255) tCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTc > 3:146643/1‑149 (MQ=255) ccTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTc < 2:289005/148‑1 (MQ=255) tCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGaa > 3:322099/1‑140 (MQ=255) tCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGaa < 4:322099/140‑1 (MQ=255) aaTGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCg > 7:351425/1‑149 (MQ=255) tGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCa < 5:298095/149‑1 (MQ=255) gTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCTGTACCAGCACCTGGTGTTCGAAGAGTTc < 1:205535/139‑1 (MQ=255) gTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTc > 2:205535/1‑139 (MQ=255) tGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCAt > 4:101450/1‑149 (MQ=255) tGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAg > 1:83261/1‑149 (MQ=255) tGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAg > 3:324362/1‑149 (MQ=255) tCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCg < 2:83261/149‑1 (MQ=255) gacgacGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCg > 5:233688/1‑147 (MQ=255) acgacgTAACCGCCATCCCCACCACGCCTGCCAACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCg > 6:345052/1‑146 (MQ=255) gTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGa > 5:173874/1‑149 (MQ=255) tAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCa > 5:275320/1‑129 (MQ=255) tAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCa < 6:275320/129‑1 (MQ=255) aCCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGa < 3:254805/149‑1 (MQ=255) aCCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGa < 4:146643/149‑1 (MQ=255) CGCCATCCCCACCACGCCTGCCGACGTCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGt < 3:111873‑M1/149‑1 (MQ=255) CGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGt > 4:324362‑M1/1‑149 (MQ=255) CCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTc < 2:8939‑M1/149‑1 (MQ=255) catcccacaccagcgcggcgatgtcggcaggcgtggtggggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTc > 7:216433‑M2/48‑148 (MQ=255) ATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCt > 5:355560‑M1/1‑149 (MQ=255) tcccacaccagcgcggcgatgtcggcaggcgtggtggggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTc < 8:216433‑M2/104‑1 (MQ=255) TCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTc > 8:81839‑M1/1‑149 (MQ=255) accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTg < 6:231265/93‑1 (MQ=255) accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTg > 5:231265/1‑93 (MQ=255) accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGc > 2:130242/1‑124 (MQ=255) accacGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGc < 1:130242/124‑1 (MQ=255) accagcgcggcgatgtcggcaggcgtggtggggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGcccc > 2:350780‑M2/40‑148 (MQ=255) aTCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGacac > 8:330313/1‑149 (MQ=255) gcgcTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGAt < 4:265150/149‑1 (MQ=255) cgcTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATc < 3:342034/149‑1 (MQ=255) cTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATCaa < 5:345052/149‑1 (MQ=255) gggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCt > 3:194644‑M2/10‑135 (MQ=255) gggatggcgAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCt < 4:194644‑M2/126‑1 (MQ=255) | ACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCCACCACGCCTGCCGACATCGCCGCGCTGGTGTGGGATGGCGAGCGGCTGTTCCAGGCCGCCAAGTTCGGCACCGAGATGCAGTACCAGCACCTGGTGTTCGAAGAGTTCGCCCGCACCATCCAGCCGCAGATTGACGAGTTCCTCGCCCCCAACGGCTACGACACCTCGATCAA > NC_002947/2912302‑2912581 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |