New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3051712 | 70 (1.190) | 5 (0.090) | 4/250 | NT | 6.7% | coding (412/1899 nt) | PP_2664 | two‑component system sensor histidine kinase/response regulator |
? | NC_002947 | = 3051725 | 73 (1.300) | coding (425/1899 nt) | PP_2664 | two‑component system sensor histidine kinase/response regulator |
GCGGGCCGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3051561‑3051712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggccTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCACTCTTCGTAAACCTTGTTGGTGAATTCGTAGACCAGATCGGCGTTCAGGTAAGCGATCAGTGCCGGGACGTTGTCGGTAATCAGGCGAATCTGGTGCTGGT < NC_002947/3051725‑3051578 GCGGGCCGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGG > 3:226355/1‑149 CGGGCCGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGCTCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGG < 8:178285/149‑1 GCCGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGC > 6:188918/1‑147 GCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCTCGCGCAGGCTCTGGCCC < 7:224131/138‑1 GCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCTCGCGCAGGCTCTGGCCC > 8:224131/1‑138 ATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGGGATGCTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATG < 7:27746/147‑1 GAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCTCGCGCAGGCTCTGGCCC > 1:160335/1‑79 GAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCTCGCGCAGGCTCTGGCCC < 2:160335/79‑1 GCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCACTCTTCGTAAACCTTGTTGGTGAATTCGTAGACCAGATCGGCGTTCAGGTAAGCGATCAGTGCCGGGACGTTGTCGGTAATCAGGCGAATCTGGTGCTG < 5:321554/149‑1 CTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCACTCTTCGTAAACCTTGTTGGTGAATTCGTAGACCAGATCGGCGTTCAGGTAAGCGATCAGTGCCGGGACGTTGTCGGTAATCAGGCGAATCTGGTGCTGGT > 1:298311/1‑149 GCGGGCCGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3051561‑3051712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggccTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCACTCTTCGTAAACCTTGTTGGTGAATTCGTAGACCAGATCGGCGTTCAGGTAAGCGATCAGTGCCGGGACGTTGTCGGTAATCAGGCGAATCTGGTGCTGGT < NC_002947/3051725‑3051578 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |