New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3051712	70 (1.190)	5 (0.090)	4/250	NT	6.7%	coding (412/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3051725	73 (1.300)					coding (425/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator

CGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACC  >  NC_002947/3051567‑3051860                                                                                                                                                  |                                                                                                                                                     cGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCaga                                                                                                                                                   <  8:289613/149‑1 (MQ=255) cGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGAGCTGGTCTACGAATTCACCAGCAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCa                                                                                                                                                     >  6:113745/1‑147 (MQ=255)       ggCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTgc                                                                                                                                             >  6:186863/1‑149 (MQ=255)            accagcaccagATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCaga                                                                                                                                                   >  4:320349/1‑138 (MQ=255)            accagcaccagATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCaga                                                                                                                                                   <  3:320349/138‑1 (MQ=255)            accagcaccagATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAg                                                                                                                                        >  1:298311‑M2/1‑148 (MQ=255)              cagcaccagATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAggc                                                                                                                                      <  5:321554‑M2/149‑4 (MQ=255)                        ttCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGag                                                                                                                            <  2:200404/149‑1 (MQ=255)                           gCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCtcgcgcaggctctggccc                                                                                                                                    >  8:224131‑M1/1‑120 (MQ=255)                           gCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCtcgcgcaggctctggccc                                                                                                                                    <  7:224131‑M1/138‑19 (MQ=255)                           gCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGagcag                                                                                                                         <  4:226355/149‑1 (MQ=255)                                aTTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGGGATGCTGGGCCtcgcgcaggctctggcccagcatcacgccatg                                                                                                                      <  7:27746‑M1/147‑33 (MQ=255)                                      gACAACGTCCCGGAACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTTCGCGCGGCCGACAGCGAGCAGCACTACCAgct                                                                                                              >  6:237693/1‑148 (MQ=255)                                            gTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTgg                                                                                                         >  3:269486/1‑148 (MQ=255)                                               ccGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAgg                                                                                                     <  5:188918/149‑1 (MQ=255)                                               ccGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAgg                                                                                                     >  2:368340/1‑149 (MQ=255)                                               ccGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAg                                                                                                      <  7:257799/148‑1 (MQ=255)                                                 ggCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCt                                                                                                   <  7:67580/149‑1 (MQ=255)                                                      tGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGc                                                                                                                                                 <  5:350406/98‑1 (MQ=255)                                                      tGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGc                                                                                                                                                 >  6:350406/1‑98 (MQ=255)                                                      tGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAgg                                                                                                     <  2:194144/142‑1 (MQ=255)                                                      tGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAgg                                                                                                     >  1:194144/1‑142 (MQ=255)                                                        aTCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGgc                                                                                            >  3:359294/1‑149 (MQ=255)                                                        aTCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGgc                                                                                            >  6:290053/1‑149 (MQ=255)                                                         tCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGgcg                                                                                           >  7:42906/1‑149 (MQ=255)                                                            cTTACCTGAACGCCGATCTGCTCTACGACTTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCgg                                                                                        <  8:221103/149‑1 (MQ=255)                                                               aCCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCa                                                                                     >  2:283672/1‑149 (MQ=255)                                                                ccTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCAc                                                                                    >  3:197577/1‑149 (MQ=255)                                                                ccTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGAGCCTGGAAGGCTATGTGGCGCGGGCAc                                                                                    >  5:334055/1‑149 (MQ=255)                                                                        ccGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCgggg                                                                            <  6:202629/149‑1 (MQ=255)                                                                              tGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCggggg                                                                           <  8:87615/144‑1 (MQ=255)                                                                              tGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCggggg                                                                           >  7:87615/1‑144 (MQ=255)                                                                                gTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCcac                                                                                                                                  >  4:118578/1‑87 (MQ=255)                                                                                gTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCcac                                                                                                                                  <  3:118578/87‑1 (MQ=255)                                                                                gTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGga                                                                          <  6:189846/143‑1 (MQ=255)                                                                                gTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGga                                                                          <  5:186863/143‑1 (MQ=255)                                                                                gTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGt                                                                    >  7:122746/1‑149 (MQ=255)                                                                                gTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGt                                                                    <  8:122746/149‑1 (MQ=255)                                                                                 tCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTg                                                                   <  1:283672/149‑1 (MQ=255)                                                                                 tCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGAGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGt                                                                    >  3:142150/1‑148 (MQ=255)                                                                                  cTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGa                                                                  >  6:190908/1‑149 (MQ=255)                                                                                   tACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGc                                                                                >  7:322027/1‑134 (MQ=255)                                                                                   tACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGc                                                                                <  8:322027/134‑1 (MQ=255)                                                                                   tACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGAc                                                                 >  4:116927/1‑149 (MQ=255)                                                                                   tACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGAc                                                                 >  2:352414/1‑149 (MQ=255)                                                                                      gAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCtcgcgcaggctctggccc                                                                                                                                    >  1:160335‑M1/1‑61 (MQ=255)                                                                                      gAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCtcgcgcaggctctggccc                                                                                                                                    <  2:160335‑M1/79‑19 (MQ=255)                                                                                       aaTTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTc                                                             <  6:334055/149‑1 (MQ=255)                                                                                       aaTTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTc                                                             <  5:290053/149‑1 (MQ=255)                                                                                       aaTTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCAGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCACAAAAACCAGCGCCTGGAAGAAAATGTGGCACGGGAAAAGGCGGGGAAGAGAGAGACgaa                                                              >  8:228514/1‑146 (MQ=255)                                                                                        aTTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCg                                                            <  2:35726/149‑1 (MQ=255)                                                                                         ttCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGa                                                           <  1:368340/149‑1 (MQ=255)                                                                                         ttCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGa                                                           <  4:269486/149‑1 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCgggg                                                                            >  7:161054/1‑129 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCgggg                                                                            <  8:161054/129‑1 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGa                                                           >  3:359762/1‑146 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGa                                                           >  3:354238/1‑146 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGa                                                           <  4:354238/146‑1 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGa                                                           <  4:359762/146‑1 (MQ=255)                                                                                            aCCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGtt                                                        >  4:296482/1‑149 (MQ=255)                                                                                             ccAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTc                                                       <  6:321554/149‑1 (MQ=255)                                                                                             ccAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTc                                                       <  1:348914/149‑1 (MQ=255)                                                                                               aacaaGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGc                                                     <  4:197577/149‑1 (MQ=255)                                                                                                acaaGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGcc                                                    <  3:296482/149‑1 (MQ=255)                                                                                                acaaGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGcc                                                    <  1:352414/149‑1 (MQ=255)                                                                                                 caaGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGcc                                                    >  2:361026/1‑148 (MQ=255)                                                                                                        tACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCa                                             <  3:116927/148‑1 (MQ=255)                                                                                                          cGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTCGAAGTCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAat                                           >  1:149952/1‑148 (MQ=255)                                                                                                           gAAGAGTTGTATTGCTGTCCGCATTGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGTCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAatt                                          <  2:149952/148‑2 (MQ=255)                                                                                                               agTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAAc                                     <  5:190908/149‑1 (MQ=255)                                                                                                                gTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAAc                                     <  5:237693/148‑1 (MQ=255)                                                                                                                 tGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGACGAGACCAATATCAACgg                                   >  2:299784/1‑149 (MQ=255)                                                                                                                   gTATTGCTGGCCGCATGGCGTGATGCTGGGAAAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGATCGCCGAGCCCAATATCAACGGc                                  >  4:126539/1‑148 (MQ=255)                                                                                                                    tATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCggg                                                                             <  1:287431/104‑1 (MQ=255)                                                                                                                    tATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCggg                                                                             >  2:287431/1‑104 (MQ=255)                                                                                                                     aTTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAg                               >  3:90434/1‑149 (MQ=255)                                                                                                                          tGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACg                          >  4:286987/1‑149 (MQ=255)                                                                                                                              cGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGcag                       >  8:307337/1‑146 (MQ=255)                                                                                                                                cATGGCGTGATGCTGGGCCAGAGCCTGCGCGAggcccagcatcccgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattcgtagaccagatcggcgttcaggtaagcgatcagtgccgggacgttgtcggtaat                      <  7:27746‑M2/147‑116 (MQ=255)                                                                                                                                 aTGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACAtg                   >  8:202399/1‑149 (MQ=255)                                                                                                                                         aTGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTc           <  1:361026/149‑1 (MQ=255)                                                                                                                                          tGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCAGCATGTAGCGTTcc          <  7:307337/149‑1 (MQ=255)                                                                                                                                             tGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTAc       >  5:343307/1‑149 (MQ=255)                                                                                                                                             tGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTAc       >  1:235236/1‑149 (MQ=255)                                                                                                                                              gggCCAGAGCCTGCGCGAggcccagcatcacgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattcgtagaccagatcggcgttcaggtaagcgatcagtgccgggacgttgtcggtaatcaggc                 <  7:224131‑M2/138‑121 (MQ=255)                                                                                                                                              gggCCAGAGCCTGCGCGAggcccagcatcacgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattcgtagaccagatcggcgttcaggtaagcgatcagtgccgggacgttgtcggtaatcaggc                 >  8:224131‑M2/1‑18 (MQ=255)                                                                                                                                              gggCCAGAGCCTGCGCGAggcccagcatcacgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattc                                                                            <  2:160335‑M2/79‑62 (MQ=255)                                                                                                                                              gggCCAGAGCCTGCGCGAggcccagcatcacgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattc                                                                            >  1:160335‑M2/1‑18 (MQ=255)                                                                                                                                               ggCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACg      >  6:287703/1‑148 (MQ=255)                                                                                                                                                gCCtcgcgcaggctctggcccagcatcacgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattcgtagaccagatcggcgttcaggtaagcgatcagtgccgggacgttgtcggtaatcaggcgaatctggtgctg    <  5:321554‑M1/149‑147 (MQ=255)                                                                                                                                                gCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTa    >  5:181809/1‑149 (MQ=255)                                                                                                                                                 ccAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTAc   >  3:98063/1‑149 (MQ=255)                                                                                                                                                 ccAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTAc   <  5:113745/149‑1 (MQ=255)                                                                                                                                                  ctcgcgcaggctctggcccagcatcacgccatgcggccagcaataccactcttcgtaaaccttgttggtgaattcgtagaccagatcggcgttcaggtaagcgatcagtgccgggacgttgtcggtaatcaggcgaatctggtgctggt  >  1:298311‑M1/1‑1 (MQ=255)                                                                                                                                                  cAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCt         <  8:219284/142‑1 (MQ=255)                                                                                                                                                  cAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCt         >  7:219284/1‑142 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CGAGACGGCCCACCAGCACCAGATTCGCCTGATTACCGACAACGTCCCGGCACTGATCGCTTACCTGAACGCCGATCTGGTCTACGAATTCACCAACAAGGTTTACGAAGAGTGGTATTGCTGGCCGCATGGCGTGATGCTGGGCCAGAGCCTGCGCGAGGCCCACAGCGAGCAGCACTACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACC  >  NC_002947/3051567‑3051860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.