New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3684225	57 (0.970)	3 (0.050)	3/248	NT	5.6%	coding (521/1284 nt)	PP_3250	transporter
	?	NC_002947	= 3684249	47 (0.840)					coding (545/1284 nt)	PP_3250	transporter

GTTCAATTTGCTGACGATCTCGCTGGCCTGGAGCGTGCTCGCCGATCTGTTTTCCACCGCCCAGGGCAAGCGGCTGTTCGGTCTGCTGGCAGCCGGGGCCAGCCTGGGCGGGCTCAGTGGCCCCGTGCTTGGCACGTTGCTGGTGGCGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3684073‑3684225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgctAGCACCAACAACCCGGCATGGCCGAGCGGCGCCACCAGCAACGTGCCAAGCACGGGGCCACTGAGCCCGCCCAGGCTGGCCCCGGCTGCCAGCAGACCGAACAGCCGCTTGCCCTGGGCGGTGGAAAACAGATCGGCGAGCACGCT  <  NC_002947/3684249‑3684104                                                                                                                                                                                                                                                                                                             GTTCAATTTGCTGACGATCTCGCTGGCCTGGAGCGTGCTCGCCGATCTGTTTTCCACCGCCCAGGGCAAGCGGCTGTTCGGTCTGCTGGCAGCCGGGGCCAGCCTGGGCGGGCTCAGTGGCCCCGTGCTTGGCACGTTGCTGGTGGCGC                                                                                                                                                        <  3:204546/149‑1                                      CTCGGCGATCTGTTTTCGACCGGCCAGGGCAAGCGGCTGTTAGGTGTGCTGGGAGCCGGGGCCAGCCTGGGCGGGCTCAGTGGCCCCGTGCTTGGCACGTTGCTGGTGGCGCCGCTAGCACCAACAACCCGGCATGGCCGAGCGGCGC                                                                                                                    <  8:38161/148‑1                                                                                           AGCCGGGGCCAGCCTGGGCGGGCTCAGTGGCCCCGTGCTTGGCACGTTGCTGGTGGCGCCGCTAGCACCAACAACCCGGCATGGCCGAGCGGC                                                                                                                      >  7:320093/1‑93                                                                                           AGCCGGGGCCAGCCTGGGCGGGCTCAGTGGCCCCGTGCTTGGCACGTTGCTGGTGGCGCCGCTAGCACCAACAACCCGGCATGGCCGAGCGGC                                                                                                                      <  8:320093/93‑1                                                                                                                                                     CCGCTAGCACCAACAACCCGGCATGGCCGAGCGGCGCCACCAGCAACGTGCCAAGCACGGGGCCACTGAGCCCGCCCAGGCTGGCCCCGGCTGCCAGCAGACCGAACAGCCGCTTGCCCTGGGCGGTGGAAAACAGATCGGCGAGCACG    >  4:276070/1‑149                                                                                                                                                     CCGCTAGCACCAACAACCCGGCATGGCCGAGCGGCGCCACCAGCAACGTGCCAAGCACGGGGCCACTGAGCCCGCCCAGGCTGGCCCCGGCTGCCAGCAGACCGAACAGCCGCTTGCCCTGGGCGGTGGAAAACAGATCGGCGAGCACG    >  7:169435/1‑149                                                                                                                                                     CCGCTAGCACCAACAACCCGGCATGGCCGAGCGGCGCCACCAGCAACGTGCCAAGCACGGGGCCACTGAGCCCGCCCAGGCTGGCCCCGGCTGCCAGCAGACCGAACAGCCGCTTGCCCTGGGCGGTGGAAAACAGATCGGCGAGCACG    >  7:174292/1‑149                                                                                                                                                       GCTAGCACCAACAACCCGGCATGGCCGAGCGGCGCCACCAGCAACGTGCCAAGCACGGGGCCACTGAGCCCGCCCAGGCTGGCCCCGGCTGCCAGCAGACCGAACAGCCGCTTGCCCTGGGCGGTGGAAAACAGATCGGCGAGCACGCT  <  2:132006/149‑1                                                                                                                                                                                                                                                                                                             GTTCAATTTGCTGACGATCTCGCTGGCCTGGAGCGTGCTCGCCGATCTGTTTTCCACCGCCCAGGGCAAGCGGCTGTTCGGTCTGCTGGCAGCCGGGGCCAGCCTGGGCGGGCTCAGTGGCCCCGTGCTTGGCACGTTGCTGGTGGCGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3684073‑3684225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgctAGCACCAACAACCCGGCATGGCCGAGCGGCGCCACCAGCAACGTGCCAAGCACGGGGCCACTGAGCCCGCCCAGGCTGGCCCCGGCTGCCAGCAGACCGAACAGCCGCTTGCCCTGGGCGGTGGAAAACAGATCGGCGAGCACGCT  <  NC_002947/3684249‑3684104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.