| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3899624 | 61 (1.040) | 4 (0.070) | 3/252 | NT | 7.0% | coding (32/1620 nt) | PP_3443 | glyceraldehyde‑3‑phosphate dehydrogenase |
| ? | NC_002947 | = 3899652 | 47 (0.830) | coding (60/1620 nt) | PP_3443 | glyceraldehyde‑3‑phosphate dehydrogenase | |||||
CCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3899515‑3899624‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccagGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGAGTGAATCGAGCAAACGGTCCATGGGTACTGCACCTCACATCAAAGGGCGGTTTTCAAGTCAGTTGAATCGTTTCAGCTACGAGCATGCACTGGCTGCAGGAAAAA < NC_002947/3899652‑3899510 CCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGA < 1:285298/148‑1CCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGA < 3:69849/148‑1 CATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGG < 5:308342/129‑1 CATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGG > 6:308342/1‑129 CCAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGAGTGAATCGAGCAAACGGTCCATGGGTACTGCACCTCACATCAAAGGGCGGTTTTCAAGTCAGTTGAATCGTTTCAGCTACGAGCATGCACTGGCTGCAGGAAAAA < 1:291865/147‑1 CAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGAGTGAATCGAGCAAACGGTCCATGGGTACTGCACCTCACATCAAAGGGCGGTTTTCAA < 3:255399/98‑1 CAGGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGAGTGAATCGAGCAAACGGTCCATGGGTACTGCACCTCACATCAAAGGGCGGTTTTCAA > 4:255399/1‑98 CCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3899515‑3899624‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccagGCGCCAGGTTTCCGGGATGTTCTCGGCGCTGGGGAAGAGTGAATCGAGCAAACGGTCCATGGGTACTGCACCTCACATCAAAGGGCGGTTTTCAAGTCAGTTGAATCGTTTCAGCTACGAGCATGCACTGGCTGCAGGAAAAA < NC_002947/3899652‑3899510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |